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L2_037_240G1_scaffold_974

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_974_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..1097
DNA (1095bp) protein (365aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEI81584.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEI81584.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
DNA polymerase III gamma/tau subunit n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DUB5_BIFLD
dnaX2; DNA polymerase III subunits gamma and tau
L2_037_240G1_scaffold_974_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1048..1308
DNA (261bp) protein (87aa)
DNA polymerase III, subunits gamma and tau n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAM7_BIFLN
dnaX2; dnax2
DNA polymerase III gamma/tau subunit {ECO:0000313|EMBL:ACD98734.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_037_240G1_scaffold_974_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1334..1936
DNA (603bp) protein (201aa)
Recombination protein RecR n=18 Tax=Bifidobacterium RepID=RECR_BIFLD
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_974_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1933..3066)
DNA (1134bp) protein (378aa)
Sortase A, LPXTG specific n=7 Tax=Bifidobacterium longum RepID=V6XWB6_BIFLN
sortase
Sortase family protein {ECO:0000313|EMBL:EEI81586.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_037_240G1_scaffold_974_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3129..3374)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9E9_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54558.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_037_240G1_scaffold_974_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3953..5236
DNA (1284bp) protein (428aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=V6XU52_BIFLN
aaa+ superfamily atpase
ATPase AAA {ECO:0000313|EMBL:KEY31892.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_037_240G1_scaffold_974_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5597..6133
DNA (537bp) protein (179aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Aspartokinase n=16 Tax=Bifidobacterium RepID=B3DUB1_BIFLD
aspartate kinase
L2_037_240G1_scaffold_974_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6157..6723
DNA (567bp) protein (189aa)
Aspartokinase n=17 Tax=Bifidobacterium RepID=B3DUB0_BIFLD
aspartate kinase
Aspartokinase {ECO:0000313|EMBL:ACD98729.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_037_240G1_scaffold_974_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6805..7899)
DNA (1095bp) protein (365aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AIW43190.1}; EC=1.2.1.11 {ECO:0000313|EMBL:AIW43190.1};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Aspartate semialdehyde dehydrogenase n=16 Tax=Bacteria RepID=D6DAM1_BIFLN
aspartate-semialdehyde dehydrogenase
L2_037_240G1_scaffold_974_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8067..8687
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=D6ZXJ7_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82806.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_037_240G1_scaffold_974_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8690..10270)
DNA (1581bp) protein (527aa)
Putative phosphohydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWY1_BIFL1
Putative phosphohydrolase {ECO:0000313|EMBL:BAP82807.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
phosphohydrolase
L2_037_240G1_scaffold_974_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10959..12875
DNA (1917bp) protein (639aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
2-isopropylmalate synthase n=2 Tax=Bifidobacterium longum RepID=B3DUA5_BIFLD
leuA; 2-isopropylmalate synthase
L2_037_240G1_scaffold_974_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12947..15412)
DNA (2466bp) protein (822aa)
Transglycosylase n=7 Tax=Bifidobacterium RepID=C5E9D8_BIFLI
Transglycosylase {ECO:0000313|EMBL:EEQ54547.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
penicillin-binding protein
L2_037_240G1_scaffold_974_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15916..16881
DNA (966bp) protein (322aa)
Peptidase n=15 Tax=Bifidobacterium RepID=F8AU47_BIFLN
peptidase
Phosphoesterase {ECO:0000313|EMBL:KEY31883.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_037_240G1_scaffold_974_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17005..20091
DNA (3087bp) protein (1029aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
DNA topoisomerase 1 n=8 Tax=Bifidobacterium RepID=Q8G6Z5_BIFLO
DNA topoisomerase I
L2_037_240G1_scaffold_974_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20368..21927
DNA (1560bp) protein (520aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EIJ22093.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIJ22093.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
DNA polymerase III delta' subunit n=8 Tax=Bifidobacterium longum RepID=E8MGC1_BIFL2
DNA polymerase III delta' subunit
L2_037_240G1_scaffold_974_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22046..22600
DNA (555bp) protein (185aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=V6XYW9_BIFLN
conserved hypothetical protein TIGR00481
Uncharacterized protein {ECO:0000313|EMBL:CBK71216.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_037_240G1_scaffold_974_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22743..24344
DNA (1602bp) protein (534aa)
Dipeptidase n=12 Tax=Bifidobacterium RepID=PEPD_BIFLO
Dipeptidase {ECO:0000313|EMBL:BAJ65826.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
dipeptidase
L2_037_240G1_scaffold_974_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24503..26020
DNA (1518bp) protein (506aa)
Formyltetrahydrofolate synthetase n=9 Tax=Bifidobacterium RepID=B3DU97_BIFLD
thfS2; thfs2
Putative formate--tetrahydrofolate ligase {ECO:0000313|EMBL:EEI81604.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_037_240G1_scaffold_974_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26324..26671)
DNA (348bp) protein (116aa)
Macrophage migration inhibitory factor n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B3J4_BIFLN
MIF domain protein
MIF domain protein {ECO:0000313|EMBL:AIW43202.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_974_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26873..27409
DNA (537bp) protein (179aa)
Predicted membrane protein n=11 Tax=Bifidobacterium RepID=D6DAK9_BIFLN
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:CBK71212.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_037_240G1_scaffold_974_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27456..27662)
DNA (207bp) protein (69aa)
Major facilitator superfamily transporter n=4 Tax=Bifidobacterium RepID=E5Y0L4_9BIFI
permease
MFS transporter {ECO:0000313|EMBL:AIW43204.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying 22 items

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