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L2_037_240G1_scaffold_1107

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_1107_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..777)
DNA (777bp) protein (259aa)
Transcriptional regulator n=8 Tax=Bifidobacterium longum RepID=E8MHB7_BIFL2
transcriptional regulator
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ32323.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_037_240G1_scaffold_1107_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1082..2452
DNA (1371bp) protein (457aa)
Transporter, NhaC family (TC 2.A.35) n=9 Tax=Bifidobacterium RepID=D6D9H4_BIFLN
nhaC; nhac
Possible Na(+)/H(+) antiporter {ECO:0000313|EMBL:AAN24918.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_037_240G1_scaffold_1107_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2466..3125)
DNA (660bp) protein (220aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=C5E802_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95163.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_1107_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3122..4492)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=B3DT40_BIFLD
hypothetical protein
Alcohol acetyltransferase {ECO:0000313|EMBL:AIW43493.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_1107_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4465..5763)
DNA (1299bp) protein (433aa)
Esterase/lipase n=11 Tax=Bifidobacterium RepID=B3DT39_BIFLD
lipase/esterase
Esterase {ECO:0000313|EMBL:KEY32528.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_037_240G1_scaffold_1107_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5901..9635)
DNA (3735bp) protein (1245aa)
Phosphoribosylformylglycinamidine synthase n=4 Tax=Bifidobacterium longum RepID=D6D9H1_BIFLN
purL; purl
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KEY23229.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_037_240G1_scaffold_1107_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9698..10450)
DNA (753bp) protein (251aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:CBK70823.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:CBK70823.1};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=18 Tax=Bacteria RepID=PUR7_BIFLD
phosphoribosylaminoimidazolesuccinocarboxamide synthase
L2_037_240G1_scaffold_1107_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10536..10658)
DNA (123bp) protein (41aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=V6XZY4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32273.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_037_240G1_scaffold_1107_9
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10843..12180)
DNA (1338bp) protein (446aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0H6_9BIFI
phosphoribosylglycinamide formyltransferase
L2_037_240G1_scaffold_1107_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12354..13514
DNA (1161bp) protein (387aa)
Glycosyltransferase n=6 Tax=Bifidobacterium RepID=B3DT35_BIFLD
rfaG2; rfag2
Glycosyltransferase {ECO:0000313|EMBL:ESV33121.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_037_240G1_scaffold_1107_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13661..14092)
DNA (432bp) protein (144aa)
Possible low specificity-threonine aldolase n=5 Tax=Bifidobacterium longum RepID=Q8G5B2_BIFLO
gly1; gly1
Threonine aldolase {ECO:0000313|EMBL:ADH00065.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_037_240G1_scaffold_1107_12
unknown

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14100..14492
DNA (393bp) protein (131aa)

This feature has no annotations

L2_037_240G1_scaffold_1107_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14785..15408
DNA (624bp) protein (208aa)
Transport protein n=11 Tax=Bifidobacterium RepID=F8ARV8_BIFLN
transporter
Uncharacterized protein {ECO:0000313|EMBL:EEQ54136.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_037_240G1_scaffold_1107_14
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16291..16761
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=24 Tax=Bifidobacterium RepID=RS7_BIFLD
rpsG; SSU ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_037_240G1_scaffold_1107_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16793..18916
DNA (2124bp) protein (708aa)
Elongation factor G n=21 Tax=Bacteria RepID=EFG_BIFLD
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
elongation factor G
L2_037_240G1_scaffold_1107_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19089..20060
DNA (972bp) protein (324aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=19 Tax=Bifidobacterium RepID=EFTU_BIFLD
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Displaying 16 items

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