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L2_037_240G1_scaffold_786

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_786_1
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19..1866)
DNA (1848bp) protein (616aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL46_DESK7
L2_037_240G1_scaffold_786_2
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1880..2593)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XKK2_CALS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP67437.1}; Flags: Precursor;; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
L2_037_240G1_scaffold_786_3
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3160..4035)
DNA (876bp) protein (292aa)
farnesyl-diphosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=2 Tax=Clostridium thermocellum RepID=D1NID7_CLOTM
Polyprenyl synthetase {ECO:0000313|EMBL:ABN52066.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L2_037_240G1_scaffold_786_4
unknown

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comp(4025..4240)
DNA (216bp) protein (72aa)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Sutterella sp. CAG:397 RepID=R7BYV9_9BURK
L2_037_240G1_scaffold_786_5
Clostridium sp. CAG:793, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4219..5463)
DNA (1245bp) protein (415aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262840 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:793.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:793 RepID=R5NRX8_9CLOT
xseA; exodeoxyribonuclease VII large subunit
L2_037_240G1_scaffold_786_6
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5457..6392)
DNA (936bp) protein (312aa)
Metallohydrolase, glycoprotease/Kae1 family n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MEV7_9FIRM
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:EFV02395.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
peptidase M22 glycoprotease
L2_037_240G1_scaffold_786_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6389..6814)
DNA (426bp) protein (142aa)
N utilization substance protein B homolog n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJK1_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
NusB antitermination factor
L2_037_240G1_scaffold_786_8
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6836..7057)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000360BB86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE89697.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
L2_037_240G1_scaffold_786_9
unknown

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comp(7077..7595)
DNA (519bp) protein (173aa)

This feature has no annotations

L2_037_240G1_scaffold_786_10
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7684..8109)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacterium RepID=I3VWN9_THESW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK86934.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
L2_037_240G1_scaffold_786_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8184..8759)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B266_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49368.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L2_037_240G1_scaffold_786_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8774..9313)
DNA (540bp) protein (180aa)
Stage III sporulation protein AG n=1 Tax=Clostridium difficile CD002 RepID=U3VXG5_CLODI
Putative stage III sporulation protein AG {ECO:0000313|EMBL:EQF25991.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
spoIIIAG; Stage III sporulation protein AG
L2_037_240G1_scaffold_786_13
unknown

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comp(9363..9542)
DNA (180bp) protein (60aa)

This feature has no annotations

L2_037_240G1_scaffold_786_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9548..10747)
DNA (1200bp) protein (400aa)
Stage III sporulation protein AE n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBS0_9CLOT
Stage III sporulation protein AE {ECO:0000313|EMBL:EOC99764.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
sporulation stage III, protein AE
L2_037_240G1_scaffold_786_15
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(10744..11124)
DNA (381bp) protein (127aa)
Stage III sporulation protein AD n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A172_MAHA5
stage III sporulation protein AD
Stage III sporulation protein AD {ECO:0000313|EMBL:AEE95975.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_037_240G1_scaffold_786_16
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11135..11332)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARI4_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:EOC99762.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
stage III sporulation protein AC
L2_037_240G1_scaffold_786_17
unknown

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comp(11348..11866)
DNA (519bp) protein (173aa)

This feature has no annotations

L2_037_240G1_scaffold_786_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(11863..12825)
DNA (963bp) protein (321aa)
Stage III sporulation protein AA n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CPG4_THEYO
Stage III sporulation protein AA {ECO:0000313|EMBL:ERM91684.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
stage III sporulation protein spoIIIAA
L2_037_240G1_scaffold_786_19
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12984..13364)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFK3_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW19166.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L2_037_240G1_scaffold_786_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13383..13940)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium sp. CAG:226 RepID=R5B761_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
translation elongation factor P (EF-P)
L2_037_240G1_scaffold_786_21
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13961..15031)
DNA (1071bp) protein (357aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L096_9FIRM
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CDB79170.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L2_037_240G1_scaffold_786_22
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15015..15899)
DNA (885bp) protein (295aa)
endonuclease IV (EC:3.1.21.2)
Endonuclease IV {ECO:0000313|EMBL:AIS52361.1}; EC=3.1.21.2 {ECO:0000313|EMBL:AIS52361.1};; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
Xylose isomerase domain protein TIM barrel n=2 Tax=Thermoanaerobacter RepID=B0K9C3_THEP3
L2_037_240G1_scaffold_786_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15964..16650)
DNA (687bp) protein (229aa)
RNA polymerase sigma factor n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R8U7_9THEO
RpoD; sporulation sigma factor SigK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
L2_037_240G1_scaffold_786_24
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(16756..17136)
DNA (381bp) protein (127aa)
GtrA-like protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PT85_9FIRM
GtrA-like protein {ECO:0000313|EMBL:ERK46954.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
GtrA family protein
L2_037_240G1_scaffold_786_25
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17262..18053)
DNA (792bp) protein (264aa)
Aminodeoxychorismate lyase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AFQ9_9CLOT
Aminodeoxychorismate lyase {ECO:0000313|EMBL:CCX41553.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
aminodeoxychorismate lyase
Displaying 25 items

View Taxonomy