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L2_037_240G1_scaffold_982

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_982_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1755)
DNA (1755bp) protein (585aa)
pheT; phenylalanine--tRNA ligase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VR64_CLOSH
L2_037_240G1_scaffold_982_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1768..3096)
DNA (1329bp) protein (443aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
pheS; phenylalanine--tRNA ligase alpha subunit PheS (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium sp. CAG:352 RepID=R6RV93_9CLOT
L2_037_240G1_scaffold_982_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3131..3886)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZBR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ48126.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
short-chain dehydrogenase/reductase SDR
L2_037_240G1_scaffold_982_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3958..4728)
DNA (771bp) protein (257aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6B8_9CLOT
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CCX50838.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
TrmH family RNA methyltransferase
L2_037_240G1_scaffold_982_5
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4788..5147)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Caloramator australicus RC3 RepID=I7LFS4_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
rplT; 50S ribosomal protein L20
L2_037_240G1_scaffold_982_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5172..5369)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Thermincola potens (strain JR) RepID=D5X805_THEPJ
50S ribosomal protein L35
Tax=BJP_08E140C01_Clostridiales_46_19
L2_037_240G1_scaffold_982_7
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5385..5918)
DNA (534bp) protein (178aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQG7_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
translation initiation factor IF-3
L2_037_240G1_scaffold_982_8
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6065..7975)
DNA (1911bp) protein (637aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3 3.1.1.-)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule:MF_00184};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Threonine--tRNA ligase n=7 Tax=Clostridium thermocellum RepID=SYT_CLOTH
L2_037_240G1_scaffold_982_9
unknown

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comp(8271..9107)
DNA (837bp) protein (279aa)

This feature has no annotations

L2_037_240G1_scaffold_982_10
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9160..10389)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bacillus coagulans 36D1 RepID=G2TK78_BACCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP01235.1}; TaxID=345219 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus coagulans 36D1.;"
L2_037_240G1_scaffold_982_11
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10561..11910)
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FAY3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFE47517.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
putative efflux protein, MATE family
L2_037_240G1_scaffold_982_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12077..12937)
DNA (861bp) protein (287aa)
4Fe-4S ferredoxin n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S3K5_9FIRM
4Fe-4S ferredoxin {ECO:0000313|EMBL:CCZ45449.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L2_037_240G1_scaffold_982_13
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13765..14505
DNA (741bp) protein (247aa)
Regulatory protein GntR HTH n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AL02_9BACI
regulatory protein GntR HTH
Regulatory protein GntR HTH {ECO:0000313|EMBL:AGK52064.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
Displaying 13 items

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