ggKbase home page

L2_037_240G1_scaffold_1147

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_1147_1
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..769
DNA (768bp) protein (256aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XZC7_9FIRM
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDA20518.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_037_240G1_scaffold_1147_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

843..1511
DNA (669bp) protein (223aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQH2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB75062.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L2_037_240G1_scaffold_1147_3
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1501..2247
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EF75_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA88722.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
peptide ABC transporter ATP-binding protein
L2_037_240G1_scaffold_1147_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2591..3739
DNA (1149bp) protein (383aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T877_PALPW
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ADQ80921.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L2_037_240G1_scaffold_1147_5
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3863..4660)
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Undecaprenyl-diphosphatase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F149_SPICH
UDP-diphosphatase
L2_037_240G1_scaffold_1147_6
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4820..5914
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1I5_CLOCD
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L2_037_240G1_scaffold_1147_7
unknown

Not on your lists

6060..7274
DNA (1215bp) protein (405aa)
UPI0003B35850 related cluster n=1 Tax=unknown RepID=UPI0003B35850
L2_037_240G1_scaffold_1147_8
unknown

Not on your lists

7362..7817
DNA (456bp) protein (152aa)

This feature has no annotations

L2_037_240G1_scaffold_1147_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7873..9309
DNA (1437bp) protein (479aa)
FAD-dependent oxidoreductase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A7P9_CLOBO
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KEH98443.1}; TaxID=1443117 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 16868.;"
L2_037_240G1_scaffold_1147_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9300..10553
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27346.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
sarcosine oxidase subunit alpha
L2_037_240G1_scaffold_1147_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10556..10912
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037B6328
hypothetical protein
Molybdopterin oxidoreductase {ECO:0000313|EMBL:KJU72141.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_037_240G1_scaffold_1147_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10956..12110)
DNA (1155bp) protein (385aa)
NADH-dependent butanol dehydrogenase A n=1 Tax=Clostridium sp. D5 RepID=F0YT81_9CLOT
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:EGB94101.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
iron-containing alcohol dehydrogenase
L2_037_240G1_scaffold_1147_13
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12282..12719)
DNA (438bp) protein (146aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QZK4_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDC38414.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
iron-containing alcohol dehydrogenase
Displaying 13 items

View Taxonomy