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L2_037_240G1_scaffold_1927

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_1927_1
unknown

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3..128
DNA (126bp) protein (42aa)

This feature has no annotations

L2_037_240G1_scaffold_1927_2
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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218..790
DNA (573bp) protein (191aa)
Ribosome-recycling factor n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D992_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
ribosome recycling factor
L2_037_240G1_scaffold_1927_3
unknown

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793..990
DNA (198bp) protein (66aa)

This feature has no annotations

L2_037_240G1_scaffold_1927_4
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1053..1811
DNA (759bp) protein (253aa)
UDP pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
Isoprenyl transferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKR6_9FIRM
L2_037_240G1_scaffold_1927_5
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1814..2623
DNA (810bp) protein (270aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
Phosphatidate cytidylyltransferase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZH6_9FIRM
cdsA; phosphatidate cytidylyltransferase
L2_037_240G1_scaffold_1927_6
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2642..3781
DNA (1140bp) protein (380aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; Short=DXP reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000255|HAMAP-Rule:MF_00183};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00183}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=DXR_ALKOO
L2_037_240G1_scaffold_1927_7
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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3865..4824
DNA (960bp) protein (320aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Putative membrane-associated zinc metalloprotease n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I2I9_DESAP
putative membrane-associated zinc metalloprotease
L2_037_240G1_scaffold_1927_8
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4837..5904
DNA (1068bp) protein (356aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UT70_9FIRM
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L2_037_240G1_scaffold_1927_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5901..7778
DNA (1878bp) protein (626aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
polC; DNA polymerase III PolC-type (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003637E08
Displaying 9 items

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