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L2_037_240G1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_91_1
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(262..3864)
DNA (3603bp) protein (1201aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJ59_9CLOT
L2_037_240G1_scaffold_91_2
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3888..6005)
DNA (2118bp) protein (706aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQI1_9CLOT
L2_037_240G1_scaffold_91_3
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6055..7605)
DNA (1551bp) protein (517aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQI1_9CLOT
L2_037_240G1_scaffold_91_4
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7869..8273)
DNA (405bp) protein (135aa)
Conserved domain protein histidine-rich n=1 Tax=Clostridium sp. CAG:169 RepID=R6CD58_9CLOT
Conserved domain protein histidine-rich {ECO:0000313|EMBL:CDA63242.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L2_037_240G1_scaffold_91_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8488..9894)
DNA (1407bp) protein (469aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
apeA; putative M18 family aminopeptidase 1 (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVQ7_9CLOT
L2_037_240G1_scaffold_91_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10033..10623)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJ55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63240.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Lytic transglycosylase catalytic
L2_037_240G1_scaffold_91_7
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10657..11286)
DNA (630bp) protein (210aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQH8_9CLOT
L2_037_240G1_scaffold_91_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11279..12352)
DNA (1074bp) protein (358aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
tRNA threonylcarbamoyl adenosine modification protein Sua5/YciO/YrdC/YwlC family n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQV5_9CLOT
conserved hypothetical protein
L2_037_240G1_scaffold_91_9
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12383..13474)
DNA (1092bp) protein (364aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVQ2_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
bacterial peptide chain release factor 1 (bRF-1)
L2_037_240G1_scaffold_91_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13540..13719)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63234.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L2_037_240G1_scaffold_91_11
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14002..14907
DNA (906bp) protein (302aa)
S1 RNA binding domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BG21_9CLOT
S1 RNA binding domain protein {ECO:0000313|EMBL:CDA63233.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
RNA binding S1 domain-containing protein
L2_037_240G1_scaffold_91_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15025..15219
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63231.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_91_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15388..15900
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJ45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63230.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hat2; hypothetical protein
L2_037_240G1_scaffold_91_14
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15918..16814
DNA (897bp) protein (299aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQH0_9CLOT
L2_037_240G1_scaffold_91_15
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16875..18662)
DNA (1788bp) protein (596aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BG16_9CLOT
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CDA63228.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_91_16
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18721..19707)
DNA (987bp) protein (329aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:169 RepID=R6CD43_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA63227.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
tagatose-bisphosphate aldolase
L2_037_240G1_scaffold_91_17
unknown

Not on your lists

comp(20017..20271)
DNA (255bp) protein (85aa)

This feature has no annotations

L2_037_240G1_scaffold_91_18
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20216..20620)
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
mgsA; Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVP4_9CLOT
L2_037_240G1_scaffold_91_19
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21091..23322)
DNA (2232bp) protein (744aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CF77_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDA75338.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
penicillin-binding protein transpeptidase
L2_037_240G1_scaffold_91_20
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23344..23862)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63224.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rod shape-determining protein MreD.
L2_037_240G1_scaffold_91_21
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23890..24777)
DNA (888bp) protein (296aa)
Cell shape-determining protein MreC n=2 Tax=root RepID=R6BG10_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Cell shape-determining protein
L2_037_240G1_scaffold_91_22
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24903..25919)
DNA (1017bp) protein (339aa)
Cell shape determining protein MreB/Mrl family n=2 Tax=root RepID=R6CD38_9CLOT
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CDA63222.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rod shape-determining protein MreB
L2_037_240G1_scaffold_91_23
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26227..26793)
DNA (567bp) protein (189aa)
Maf-like protein BN513_00686 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVP1_9CLOT
Maf-like protein BN513_00686 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
septum formation protein Maf
L2_037_240G1_scaffold_91_24
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26829..27269)
DNA (441bp) protein (147aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|SAAS:SAAS00071038}; EC=3.6.1.23 {ECO:0000256|SAAS:SAAS00071036};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJ36_9CLOT
L2_037_240G1_scaffold_91_25
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27280..29358)
DNA (2079bp) protein (693aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63219.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_91_26
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29435..30007)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BG06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63218.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
GNAT family acetyltransferase
L2_037_240G1_scaffold_91_27
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30087..30452)
DNA (366bp) protein (122aa)
Cell division protein ZapA n=1 Tax=Clostridium sp. CAG:169 RepID=R6CD32_9CLOT
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Cell division protein ZapA.
L2_037_240G1_scaffold_91_28
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30862..33315
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVN6_9CLOT
L2_037_240G1_scaffold_91_29
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33401..35293
DNA (1893bp) protein (631aa)
Glycosidases (EC:3.2.1.41)
Alpha amylase catalytic domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJ31_9CLOT
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CDA63215.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_91_30
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35446..35673
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63214.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Displaying items 1-30 of 106 in total

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