ggKbase home page

L2_037_240G1_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_188_1
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(386..1270)
DNA (885bp) protein (295aa)
33 kDa chaperonin n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQ98_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hslO; 33 kDa chaperonin
L2_037_240G1_scaffold_188_2
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1292..2083)
DNA (792bp) protein (264aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVD4_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDA63091.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Methyltransferase domain.
L2_037_240G1_scaffold_188_3
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2073..2372)
DNA (300bp) protein (100aa)
TrpR family protein YerC/YecD n=1 Tax=Clostridium sp. CAG:169 RepID=R6BFR2_9CLOT
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CDA63093.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
TrpR-related protein YerC/YecD
L2_037_240G1_scaffold_188_4
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2601..3899)
DNA (1299bp) protein (433aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Diaminopimelate decarboxylase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ44_9CLOT
diaminopimelate decarboxylase
L2_037_240G1_scaffold_188_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3950..4696)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BIS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63095.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
methyltransferase
L2_037_240G1_scaffold_188_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4687..5304)
DNA (618bp) protein (206aa)
Probable GTP-binding protein EngB n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVD9_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L2_037_240G1_scaffold_188_7
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5329..7779)
DNA (2451bp) protein (817aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
lon; Lon protease (EC:3.4.21.53)
Lon protease n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZV8_9FIRM
L2_037_240G1_scaffold_188_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7845..7976)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63099.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_188_9
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7976..9235)
DNA (1260bp) protein (420aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:169 RepID=R6BIT3_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_037_240G1_scaffold_188_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9322..9903)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVE2_9CLOT
L2_037_240G1_scaffold_188_11
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10239..11594)
DNA (1356bp) protein (452aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
tig; Trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Clostridium sp. CAG:169 RepID=R6CCT3_9CLOT
L2_037_240G1_scaffold_188_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11924..12613)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BFR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63103.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Predicted phosphohydrolase
L2_037_240G1_scaffold_188_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12617..13390)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63104.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_188_14
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13403..13603)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63106.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_188_15
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13600..14532)
DNA (933bp) protein (311aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BFS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63108.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_188_16
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14581..14967)
DNA (387bp) protein (129aa)
UPF0102 protein RUM_08570 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVF0_9CLOT
UPF0102 protein RUM_08570 {ECO:0000313|EMBL:CDA63111.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
conserved hypothetical protein TIGR00252
L2_037_240G1_scaffold_188_17
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14974..15624)
DNA (651bp) protein (217aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rnhB; Ribonuclease HII (EC:3.1.26.4)
Ribonuclease n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQ63_9CLOT
L2_037_240G1_scaffold_188_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15624..16565)
DNA (942bp) protein (314aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:242 RepID=R6CTA8_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
conserved hypothetical protein
L2_037_240G1_scaffold_188_19
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16601..17227)
DNA (627bp) protein (209aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium sp. CAG:169 RepID=R6BKV2_9CLOT
L2_037_240G1_scaffold_188_20
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17339..17683)
DNA (345bp) protein (115aa)
50S ribosomal protein L19 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BB66_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
rplS; ribosomal protein L19
L2_037_240G1_scaffold_188_21
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17988..20549)
DNA (2562bp) protein (854aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLW4_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CDA78872.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
conserved hypothetical protein
L2_037_240G1_scaffold_188_22
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20733..21221
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61430.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L2_037_240G1_scaffold_188_23
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21386..21772
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BKU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61429.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L2_037_240G1_scaffold_188_24
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21805..22395)
DNA (591bp) protein (197aa)
Peptidase M50 family n=1 Tax=Clostridium sp. CAG:169 RepID=R6BB61_9CLOT
Peptidase M50 family {ECO:0000313|EMBL:CDA61428.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Peptidase family M50.
L2_037_240G1_scaffold_188_25
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22382..23221)
DNA (840bp) protein (280aa)
Peptidase M23 family n=1 Tax=Clostridium sp. CAG:169 RepID=R6C7Q1_9CLOT
Peptidase M23 family {ECO:0000313|EMBL:CDA61427.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
peptidase M23
L2_037_240G1_scaffold_188_26
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23458..24621
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BQP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61426.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
amidohydrolase
L2_037_240G1_scaffold_188_27
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24643..25809
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61425.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
amidohydrolase
L2_037_240G1_scaffold_188_28
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25872..26720)
DNA (849bp) protein (283aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BKU1_9CLOT
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CDA61424.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
endonuclease/exonuclease/phosphatase
L2_037_240G1_scaffold_188_29
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26846..28492)
DNA (1647bp) protein (549aa)
Cell division protein FtsI/penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BB52_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDA61423.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
L2_037_240G1_scaffold_188_30
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28690..29595
DNA (906bp) protein (302aa)
Arginase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDF0_9CLOT
Arginase {ECO:0000313|EMBL:CDA61255.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
arginase
Displaying items 1-30 of 98 in total

View Taxonomy