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L2_038_000M1_scaffold_2383

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_2383_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..191
DNA (189bp) protein (63aa)
Putative membrane protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA0_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EFQ06045.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
EamA-like transporter family.
L2_038_000M1_scaffold_2383_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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188..1003
DNA (816bp) protein (272aa)
Mg-dependent DNase (EC:3.1.21.-)
Hydrolase, TatD family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA1_9FIRM
Hydrolase, TatD family {ECO:0000313|EMBL:EFQ06046.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_038_000M1_scaffold_2383_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1093..1326
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06047.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_038_000M1_scaffold_2383_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1476..2294)
DNA (819bp) protein (273aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ06048.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type uncharacterized transport system, ATPase component
L2_038_000M1_scaffold_2383_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2296..3240)
DNA (945bp) protein (315aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA4_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFQ06049.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type uncharacterized transport system, permease component
L2_038_000M1_scaffold_2383_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3533..4630)
DNA (1098bp) protein (366aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA6_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ06051.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type uncharacterized transport system, periplasmic component
L2_038_000M1_scaffold_2383_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5077..7464)
DNA (2388bp) protein (796aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06052.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Bacterial membrane protein YfhO.
L2_038_000M1_scaffold_2383_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7596..8186
DNA (591bp) protein (197aa)
Predicted hydrolases of HD superfamily (EC:3.1.3.5)
HD domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA8_9FIRM
HD domain protein {ECO:0000313|EMBL:EFQ06053.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_038_000M1_scaffold_2383_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8195..9214)
DNA (1020bp) protein (340aa)
tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLA9_9FIRM
TIM-barrel protein, nifR3 family {ECO:0000313|EMBL:EFQ06054.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
tRNA-U20-dihydrouridine synthase
L2_038_000M1_scaffold_2383_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9454..11268)
DNA (1815bp) protein (605aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLB0_9FIRM
L2_038_000M1_scaffold_2383_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11302..11778)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06021.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_038_000M1_scaffold_2383_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11794..12621)
DNA (828bp) protein (276aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLB2_9FIRM
L2_038_000M1_scaffold_2383_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12614..13705)
DNA (1092bp) protein (364aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLB3_9FIRM
L2_038_000M1_scaffold_2383_14
unknown

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14014..14127
DNA (114bp) protein (38aa)

This feature has no annotations

L2_038_000M1_scaffold_2383_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14099..14233
DNA (135bp) protein (45aa)
Protein translocase subunit SecE n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLB6_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
preprotein translocase, SecE subunit, bacterial
L2_038_000M1_scaffold_2383_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14264..14797
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLB7_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcription antitermination protein nusG
L2_038_000M1_scaffold_2383_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14934..15359
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAR0_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_038_000M1_scaffold_2383_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15417..15980
DNA (564bp) protein (188aa)
50S ribosomal protein L1 n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAR1_9FIRM
LSU ribosomal protein L1P
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying 18 items

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