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L2_038_000M1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_37_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

421..1764
DNA (1344bp) protein (448aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Adenylosuccinate lyase n=6 Tax=Bacteroidales RepID=A6LI99_PARD8
L2_038_000M1_scaffold_37_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1824..3311
DNA (1488bp) protein (496aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Pseudouridine synthase n=1 Tax=Parabacteroides sp. D25 RepID=K6AJF9_9PORP
ribosomal large subunit pseudouridine synthase B
L2_038_000M1_scaffold_37_3
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3327..4733
DNA (1407bp) protein (469aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMY7_9BACE
L2_038_000M1_scaffold_37_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4817..5287)
DNA (471bp) protein (157aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6LIA2_PARD8
transcriptional regulator
AsnC family protein {ECO:0000313|EMBL:KDS42262.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L2_038_000M1_scaffold_37_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5432..5980
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AWG1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28151.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_038_000M1_scaffold_37_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6033..6503)
DNA (471bp) protein (157aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LIA4_PARD8
hypothetical protein
Biopolymer transport ExbD/TolR family protein {ECO:0000313|EMBL:KDS75116.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_038_000M1_scaffold_37_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6503..7093)
DNA (591bp) protein (197aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LIA5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45419.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_038_000M1_scaffold_37_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7126..7599)
DNA (474bp) protein (158aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LIA6_PARD8
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KDS75114.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_038_000M1_scaffold_37_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7609..8352)
DNA (744bp) protein (248aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=5 Tax=Bacteroidales RepID=C7X674_9PORP
MotA/TolQ/ExbB proton channel family protein biopolymer transport protein
Uncharacterized protein {ECO:0000313|EMBL:EKN28147.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_038_000M1_scaffold_37_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8668..9453)
DNA (786bp) protein (262aa)
Hydrolase, TatD family n=4 Tax=Bacteroidales RepID=C7X675_9PORP
deoxyribonuclease
Hydrolase, TatD family {ECO:0000313|EMBL:EFI10721.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_038_000M1_scaffold_37_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9457..10431)
DNA (975bp) protein (325aa)
Polyprenyl synthetase n=3 Tax=Bacteroidales RepID=D7IMZ5_9BACE
isoprenoid biosynthesis-like protein
Polyprenyl synthetase {ECO:0000313|EMBL:EFI10722.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_038_000M1_scaffold_37_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10512..11204)
DNA (693bp) protein (231aa)
TonB-dependent receptor n=5 Tax=Bacteroidales RepID=C7X677_9PORP
TonB family domain-containing protein {ECO:0000313|EMBL:EKN20978.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
outer membrane protein TonB
L2_038_000M1_scaffold_37_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11209..11367)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TD45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS42271.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L2_038_000M1_scaffold_37_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11412..12422
DNA (1011bp) protein (337aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LIB1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN28143.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_038_000M1_scaffold_37_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12449..13138
DNA (690bp) protein (230aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Cytidylate kinase n=4 Tax=Parabacteroides RepID=KCY_PARD8
cmk; cytidylate kinase
L2_038_000M1_scaffold_37_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13323..14195
DNA (873bp) protein (291aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=4 Tax=Parabacteroides RepID=ISPH_PARD8
L2_038_000M1_scaffold_37_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14293..15273
DNA (981bp) protein (327aa)
6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
6-phosphofructokinase n=9 Tax=Bacteroidales RepID=A6LIB4_PARD8
L2_038_000M1_scaffold_37_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15355..17106
DNA (1752bp) protein (584aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C7X682_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10728.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transmembrane protein
L2_038_000M1_scaffold_37_19
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17119..18582
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z2H9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85355.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L2_038_000M1_scaffold_37_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18632..19729)
DNA (1098bp) protein (366aa)
LAO/AO transport system ATPase {ECO:0000313|EMBL:KDS75102.1}; EC=2.7.-.- {ECO:0000313|EMBL:KDS75102.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Putative ArgK protein with ATPase and kinase domains n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LIB7_PARD8
arginine/ornithine transport system ATPase
L2_038_000M1_scaffold_37_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19739..20848)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=A6LIB8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN20970.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L2_038_000M1_scaffold_37_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20876..21253)
DNA (378bp) protein (126aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LIB9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45433.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_038_000M1_scaffold_37_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21446..27127)
DNA (5682bp) protein (1894aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AYZ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20968.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L2_038_000M1_scaffold_37_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27215..27712)
DNA (498bp) protein (166aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Dihydrofolate reductase n=9 Tax=Bacteroidales RepID=A6LIC1_PARD8
dihydrofolate reductase
L2_038_000M1_scaffold_37_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27788..28582)
DNA (795bp) protein (265aa)
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Thymidylate synthase n=7 Tax=Bacteroidales RepID=TYSY_PARD8
L2_038_000M1_scaffold_37_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28654..28830
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z3E4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21297.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_038_000M1_scaffold_37_27
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28976..30124
DNA (1149bp) protein (383aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Aldose 1-epimerase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TD32_9BACE
aldose 1-epimerase
L2_038_000M1_scaffold_37_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30313..30429
DNA (117bp) protein (39aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZMF3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS75095.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_038_000M1_scaffold_37_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30663..31031
DNA (369bp) protein (123aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LID0_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KDS42286.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L2_038_000M1_scaffold_37_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31023..32999)
DNA (1977bp) protein (659aa)
Outer membrane protein OmpA family protein n=3 Tax=Bacteroidales RepID=A6LID1_PARD8
outer membrane protein OmpA family protein
Uncharacterized protein {ECO:0000313|EMBL:EKN28125.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Displaying items 1-30 of 178 in total

View Taxonomy