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L2_038_000M1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_58_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(217..1560)
DNA (1344bp) protein (448aa)
Outer membrane protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP42_9BACT
Outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:CBK64704.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_58_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1557..4598)
DNA (3042bp) protein (1014aa)
Cation/multidrug efflux pump n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP43_9BACT
Cation/multidrug efflux pump {ECO:0000313|EMBL:CBK64705.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Cation/multidrug efflux pump
L2_038_000M1_scaffold_58_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4611..5693)
DNA (1083bp) protein (361aa)
RND family efflux transporter MFP subunit n=1 Tax=Alistipes sp. CAG:53 RepID=R5WMP4_9BACT
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CCZ97196.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RND family efflux transporter, MFP subunit
L2_038_000M1_scaffold_58_4
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6372..7433)
DNA (1062bp) protein (354aa)
Peroxiredoxin n=1 Tax=Alistipes sp. CAG:53 RepID=R5WA13_9BACT
Peroxiredoxin {ECO:0000313|EMBL:CCZ96994.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
peroxiredoxin
L2_038_000M1_scaffold_58_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7444..8484)
DNA (1041bp) protein (347aa)
Peroxiredoxin n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP56_9BACT
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:CBK64718.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_58_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8510..9100)
DNA (591bp) protein (197aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Alistipes sp. JC136 RepID=UPI00028860D3
L2_038_000M1_scaffold_58_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9197..10255)
DNA (1059bp) protein (353aa)
Thiol-disulfide isomerase and thioredoxins n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP58_9BACT
Thiol-disulfide isomerase and thioredoxins
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:CBK64720.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_58_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10260..11297)
DNA (1038bp) protein (346aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Alistipes sp. CAG:53 RepID=R5W2X6_9BACT
L2_038_000M1_scaffold_58_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11489..11959)
DNA (471bp) protein (157aa)
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Phosphopantetheine adenylyltransferase n=2 Tax=Alistipes RepID=D4IP60_9BACT
L2_038_000M1_scaffold_58_10
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12032..12334)
DNA (303bp) protein (101aa)
RNA polymerase sigma-70 factor n=1 Tax=Alistipes sp. JC136 RepID=UPI000289484A
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ96988.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RNA polymerase sigma-70 factor
L2_038_000M1_scaffold_58_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12850..13911)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UE19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76255.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_038_000M1_scaffold_58_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13942..14835)
DNA (894bp) protein (298aa)
endonuclease n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EB0C7D
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFR58233.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
metal-dependent hydrolase
L2_038_000M1_scaffold_58_13
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14870..16645)
DNA (1776bp) protein (592aa)
RagB/SusD family protein n=3 Tax=Alistipes RepID=I3YKD1_ALIFI
RagB/SusD family protein {ECO:0000313|EMBL:CCZ76253.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RagB/SusD family protein
L2_038_000M1_scaffold_58_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16666..20181)
DNA (3516bp) protein (1172aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKD0_ALIFI
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77448.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
SusC/RagA family TonB-linked outer membrane protein
L2_038_000M1_scaffold_58_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20308..21309)
DNA (1002bp) protein (334aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP65_9BACT
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:CBK64727.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_58_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21388..21981)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289AE10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76839.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_038_000M1_scaffold_58_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22037..22729)
DNA (693bp) protein (231aa)
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WM86_9BACT
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:CCZ96981.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
L2_038_000M1_scaffold_58_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22753..23823)
DNA (1071bp) protein (357aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CBK64728.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK64728.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
DNA polymerase III, delta subunit n=2 Tax=Alistipes RepID=D4IP66_9BACT
L2_038_000M1_scaffold_58_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23825..25168)
DNA (1344bp) protein (448aa)
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
tRNA(Ile)-lysidine synthase n=2 Tax=Alistipes RepID=D4IP67_9BACT
L2_038_000M1_scaffold_58_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25165..26172)
DNA (1008bp) protein (336aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP68_9BACT
L2_038_000M1_scaffold_58_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26439..27872
DNA (1434bp) protein (478aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP69_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64731.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_58_22
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27980..30070)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=2 Tax=root RepID=A7UY00_BACUN
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
L2_038_000M1_scaffold_58_23
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30391..31347
DNA (957bp) protein (319aa)
FucR protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IL29_9PORP
FucR protein {ECO:0000313|EMBL:CCY37431.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
transcriptional regulator, FucR
L2_038_000M1_scaffold_58_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31428..33206
DNA (1779bp) protein (593aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L-fucose isomerase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UE73_9BACT
L-fucose isomerase
L2_038_000M1_scaffold_58_25
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33245..34441
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EP96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB72472.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
hypothetical protein
L2_038_000M1_scaffold_58_26
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34480..35901
DNA (1422bp) protein (474aa)
L-fucose:H+ symporter permease n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E1K7_9BACE
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EKU90999.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
L-fucose transporter
L2_038_000M1_scaffold_58_27
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35898..37532
DNA (1635bp) protein (545aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L-ribulokinase (EC:2.7.1.16)
Ribulokinase n=1 Tax=Bacteroides sp. D20 RepID=D2EX07_9BACE
L2_038_000M1_scaffold_58_28
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37534..39285
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DVE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU88388.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
L2_038_000M1_scaffold_58_29
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39291..41252
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5C7V7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM88995.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
heparinase II/III family protein
L2_038_000M1_scaffold_58_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41281..43251
DNA (1971bp) protein (657aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B7476
Uncharacterized protein {ECO:0000313|EMBL:EIY75024.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
Displaying items 1-30 of 110 in total

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