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L2_038_000M1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_102_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..1190
DNA (1188bp) protein (396aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4V8U1_BIFBI
DNA repair related putative ATPase
Uncharacterized protein {ECO:0000313|EMBL:ADO52890.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_102_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1607..1744
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPW7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52889.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_102_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1758..1985)
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4V8T9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42727.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_038_000M1_scaffold_102_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1961..2176)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPW5_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52887.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_102_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2536..5112)
DNA (2577bp) protein (859aa)
ATP-dependent clp protease n=11 Tax=Bifidobacterium RepID=E3EPW4_BIFBS
ATP-dependent Clp protease ATP-binding subunit {ECO:0000313|EMBL:BAQ97855.1}; Hemolysin B {ECO:0000313|EMBL:ERI83134.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
clpC; genetic competence regulator ClpC
L2_038_000M1_scaffold_102_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5249..6244
DNA (996bp) protein (332aa)
Universal stress protein family n=6 Tax=Bifidobacterium RepID=E3EPW3_BIFBS
uspA; universal stress protein
Universal stress protein family {ECO:0000313|EMBL:KFI42725.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_038_000M1_scaffold_102_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6395..7468)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPY9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50855.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_038_000M1_scaffold_102_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7487..7876)
DNA (390bp) protein (130aa)
Cold shock protein n=7 Tax=Bifidobacterium RepID=E3EPW1_BIFBS
cspB; Cold shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFR50026.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_038_000M1_scaffold_102_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7993..9942)
DNA (1950bp) protein (650aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Two-component system histidine kinase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GNE5_9BIFI
two-component system histidine kinase
L2_038_000M1_scaffold_102_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9953..10690)
DNA (738bp) protein (246aa)
Two-component response regulator n=6 Tax=Bifidobacterium bifidum RepID=E3EPV9_BIFBS
two-component response regulator
Response regulator of two-component system {ECO:0000313|EMBL:AFL04231.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_038_000M1_scaffold_102_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10674..11804)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7G6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50859.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_038_000M1_scaffold_102_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11892..12185
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WH66_BIFBI
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_038_000M1_scaffold_102_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12346..13971)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HA34_BIFBI
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
groEL; molecular chaperone GroEL
L2_038_000M1_scaffold_102_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14271..14540)
DNA (270bp) protein (90aa)
Cold shock protein n=7 Tax=Bifidobacterium RepID=E3EPV5_BIFBS
cspA; Cold shock protein
Cold shock protein {ECO:0000313|EMBL:ADO52877.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_102_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14630..15376)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V8S6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50863.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_038_000M1_scaffold_102_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15457..16248
DNA (792bp) protein (264aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
uracil-DNA glycosylase n=1 Tax=Bifidobacterium bifidum RepID=UPI0002FC9F37
ung; uracil-DNA glycosylase
L2_038_000M1_scaffold_102_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16286..17365
DNA (1080bp) protein (360aa)
Methanol dehydrogenase regulator n=3 Tax=Bifidobacterium bifidum RepID=I3WH61_BIFBI
ATPase AAA
Uncharacterized protein {ECO:0000313|EMBL:ADO52874.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_102_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17362..18369
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V8S3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50015.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_038_000M1_scaffold_102_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18366..18938
DNA (573bp) protein (191aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=K2HWM6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83117.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_038_000M1_scaffold_102_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18938..20011
DNA (1074bp) protein (358aa)
von Willebrand factor type A domain protein n=2 Tax=Bifidobacterium bifidum RepID=U2DTM2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97840.1}; von Willebrand factor type A domain protein {ECO:0000313|EMBL:ERI83116.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_102_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20008..21036
DNA (1029bp) protein (343aa)
von Willebrand factor, type A n=7 Tax=Bifidobacterium RepID=I3WH57_BIFBI
von Willebrand factor, type A
Membrane spanning protein with a von Willebrand factor type A domain {ECO:0000313|EMBL:KFI42710.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_038_000M1_scaffold_102_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21033..21653
DNA (621bp) protein (207aa)
cell surface protein n=1 Tax=Bifidobacterium bifidum RepID=UPI000378FB6D
Uncharacterized protein {ECO:0000313|EMBL:BAQ97838.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_038_000M1_scaffold_102_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22246..22560
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WH54_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42708.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_038_000M1_scaffold_102_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22557..24092
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HWM9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50872.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_038_000M1_scaffold_102_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24251..25687
DNA (1437bp) protein (479aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000313|EMBL:AFL04215.1}; EC=4.3.2.2 {ECO:0000313|EMBL:AFL04215.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Adenylosuccinate lyase n=3 Tax=Bifidobacterium bifidum RepID=I3WH52_BIFBI
L2_038_000M1_scaffold_102_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25740..28244
DNA (2505bp) protein (835aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R6GM62_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22754.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_038_000M1_scaffold_102_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28375..28656
DNA (282bp) protein (94aa)
DNA-binding protein HU n=8 Tax=Bifidobacterium RepID=E3ENY9_BIFBS
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:BAQ97834.1}; DNA-binding protein HB1 {ECO:0000313|EMBL:ERI83107.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_102_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28823..30283)
DNA (1461bp) protein (487aa)
Proteasome accessory factor PafA {ECO:0000313|EMBL:EFR50005.1}; EC=6.3.2.- {ECO:0000313|EMBL:EFR50005.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Proteasome accessory factor PafA n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8R3_BIFBI
hypothetical protein
L2_038_000M1_scaffold_102_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30280..30483)
DNA (204bp) protein (68aa)
Ubiquitin-like protein Pup n=3 Tax=Bifidobacterium bifidum RepID=E4V8R2_BIFBI
hypothetical protein
Ubiquitin-like protein Pup {ECO:0000313|EMBL:ERI83105.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97832.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_102_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30637..31455)
DNA (819bp) protein (273aa)
Inositol monophosphatase family protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GED9_9BIFI
Inositol monophosphatase family protein {ECO:0000313|EMBL:CDB22750.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Inositol monophosphatase family protein
Displaying items 1-30 of 102 in total

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