ggKbase home page

L2_038_000M1_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_131_1
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..457)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MFW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90418.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L2_038_000M1_scaffold_131_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(480..671)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MFE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90420.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L2_038_000M1_scaffold_131_3

Not on your lists

1522..2364
DNA (843bp) protein (281aa)
Site-specific recombinase, phage integrase family (Fragment) n=1 Tax=human gut metagenome RepID=K1SUA1_9ZZZZ
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EKC57420.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
integrase family protein
L2_038_000M1_scaffold_131_4
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2693..3826
DNA (1134bp) protein (378aa)
antifreeze protein type I n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3765A
Uncharacterized protein {ECO:0000313|EMBL:EEJ50491.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
hypothetical protein
L2_038_000M1_scaffold_131_5
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3840..4523
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DX41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88871.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L2_038_000M1_scaffold_131_6
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4729..5748
DNA (1020bp) protein (340aa)
Cold-shock DNA-binding domain protein id=3866967 bin=GWF2_Bacteroidetes_40_14 species=Clostridium clostridioforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CDE04881.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_038_000M1_scaffold_131_7
unknown

Not on your lists

5861..6106
DNA (246bp) protein (82aa)

This feature has no annotations

L2_038_000M1_scaffold_131_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6354..7799)
DNA (1446bp) protein (482aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92054.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L2_038_000M1_scaffold_131_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8115..9494
DNA (1380bp) protein (460aa)
Polyunsaturated fatty acid isomerase conjugated linoleic acid-producing n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3C2_9FIRM
Polyunsaturated fatty acid isomerase conjugated linoleic acid-producing {ECO:0000313|EMBL:CCY92056.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
aminooxidase
L2_038_000M1_scaffold_131_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9508..12366
DNA (2859bp) protein (953aa)
NADPH-dependent glutamate synthase beta chain and related oxidoreductases n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I746_9FIRM
NADPH-dependent glutamate synthase beta chain and related oxidoreductases {ECO:0000313|EMBL:CDB42314.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L2_038_000M1_scaffold_131_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12370..12717
DNA (348bp) protein (116aa)
Hydrogenase expression/synthesis HypA n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK15_9FIRM
Hydrogenase expression/synthesis HypA {ECO:0000313|EMBL:CCY92060.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hydrogenase nickel incorporation protein HypA
L2_038_000M1_scaffold_131_12
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12755..13795)
DNA (1041bp) protein (347aa)
Glutamyl aminopeptidase M42 family n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3C6_9FIRM
Glutamyl aminopeptidase M42 family {ECO:0000313|EMBL:CCY92061.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
glutamyl aminopeptidase M42 family
L2_038_000M1_scaffold_131_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14519..14983)
DNA (465bp) protein (155aa)
SsrA-binding protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQX8_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
SsrA-binding protein
L2_038_000M1_scaffold_131_14
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15035..15631)
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=root RepID=R5N3F1_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
recombination protein RecR
L2_038_000M1_scaffold_131_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15631..15975)
DNA (345bp) protein (115aa)
Nucleoid-associated protein BN519_01302 n=2 Tax=root RepID=R5MKY4_9FIRM
Nucleoid-associated protein BN519_01302 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L2_038_000M1_scaffold_131_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16008..17705)
DNA (1698bp) protein (566aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK46_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CCY92100.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
DNA polymerase III subunits gamma and tau
L2_038_000M1_scaffold_131_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18045..19013)
DNA (969bp) protein (323aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N4K6_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CCY92102.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
putative protein Rv1488/MT1533,2
L2_038_000M1_scaffold_131_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19033..19485)
DNA (453bp) protein (151aa)
Putative integral membrane protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQY6_9FIRM
Putative integral membrane protein {ECO:0000313|EMBL:CCY92104.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
putative integral membrane protein
L2_038_000M1_scaffold_131_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19907..21163)
DNA (1257bp) protein (419aa)
ABC transporter permease protein n=2 Tax=root RepID=R5N3F7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY92106.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
macrolide efflux ABC transporter permease
L2_038_000M1_scaffold_131_20
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21193..22764)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N4L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92107.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
RND family transporter
L2_038_000M1_scaffold_131_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22859..23446
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MKZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92108.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L2_038_000M1_scaffold_131_22
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23465..24586)
DNA (1122bp) protein (374aa)
Patatin n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK54_9FIRM
Patatin {ECO:0000313|EMBL:CCY92110.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
patatin
L2_038_000M1_scaffold_131_23
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24810..25493)
DNA (684bp) protein (228aa)
Class II aldolase/adducin family protein n=2 Tax=root RepID=R5N4L3_9FIRM
Class II aldolase/adducin family protein {ECO:0000313|EMBL:CCY92112.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
class II aldolase/adducin family protein
L2_038_000M1_scaffold_131_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25519..25953)
DNA (435bp) protein (145aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
Fucose transporter n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK58_9FIRM
Fucose transporter {ECO:0000313|EMBL:CCY92115.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L2_038_000M1_scaffold_131_25
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25946..27424)
DNA (1479bp) protein (493aa)
fucK; L-fuculokinase (EC:2.7.1.51)
L-fuculokinase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3G4_9FIRM
L-fuculokinase {ECO:0000313|EMBL:CCY92116.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L2_038_000M1_scaffold_131_26
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27433..29226)
DNA (1794bp) protein (598aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=3 Tax=root RepID=R5N4L5_9FIRM
L2_038_000M1_scaffold_131_27
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29355..30212
DNA (858bp) protein (286aa)
Transcriptional regulator AraC family n=2 Tax=root RepID=R5MKZ6_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY92118.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
AraC family transcriptional regulator
L2_038_000M1_scaffold_131_28
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30260..30562)
DNA (303bp) protein (101aa)
O-6-methylguanine DNA methyltransferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MR00_9FIRM
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CCY92119.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
O-6-methylguanine DNA methyltransferase
L2_038_000M1_scaffold_131_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30595..31776)
DNA (1182bp) protein (394aa)
Germination protein Ger(X)C family n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK63_9FIRM
Germination protein Ger(X)C family {ECO:0000313|EMBL:CCY92120.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
germination protein, Ger(x)C family
L2_038_000M1_scaffold_131_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31773..32858)
DNA (1086bp) protein (362aa)
Spore germination protein (Amino acid permease) n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3G6_9FIRM
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:CCY92121.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
spore germination protein, amino acid permease
Displaying items 1-30 of 100 in total

View Taxonomy