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L2_038_000M1_scaffold_137

Search features with annotation key words

Displaying items 1-30 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_137_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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310..900
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXA5_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96040.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ATP synthase subunit E
L2_038_000M1_scaffold_137_2
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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910..1749
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5CXA6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ88512.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L2_038_000M1_scaffold_137_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1765..3522
DNA (1758bp) protein (586aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ATP synthase alpha/beta family, nucleotide-binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXA7_BACPM
ATP synthase subunit A
L2_038_000M1_scaffold_137_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3547..4866
DNA (1320bp) protein (440aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
ATP synthase alpha/beta family, nucleotide-binding domain protein n=2 Tax=Bacteroides RepID=B5CXA8_BACPM
ATP synthase alpha/beta family, nucleotide-binding domain protein {ECO:0000313|EMBL:EDY96043.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L2_038_000M1_scaffold_137_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4884..5489
DNA (606bp) protein (202aa)
V-type ATPase, D subunit {ECO:0000313|EMBL:EDY96044.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EDY96044.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
V-type ATPase, D subunit n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXA9_BACPM
ATP synthase subunit D
L2_038_000M1_scaffold_137_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5486..7294
DNA (1809bp) protein (603aa)
V-type ATPase 116kDa subunit family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXB0_BACPM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
V-type ATP synthase subunit I
L2_038_000M1_scaffold_137_7
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7330..7791
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD55_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88518.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
ATP synthase subunit K
L2_038_000M1_scaffold_137_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8044..9720
DNA (1677bp) protein (559aa)
Starch synthase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXB2_BACPM
Starch synthase {ECO:0000313|EMBL:EDY96047.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
glycosyltransferase family alpha-glycosyltransferase
L2_038_000M1_scaffold_137_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9741..12308
DNA (2568bp) protein (856aa)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EDY96048.1}; EC=2.4.1.1 {ECO:0000313|EMBL:EDY96048.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXB3_BACPM
L2_038_000M1_scaffold_137_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12403..13080
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXB4_BACPM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDY96049.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
two component transcriptional regulator, winged helix family
L2_038_000M1_scaffold_137_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13077..14345
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W7E9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88522.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
integral membrane sensor signal transduction histidine kinase
L2_038_000M1_scaffold_137_12
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14453..14887
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5CXB6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96051.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L2_038_000M1_scaffold_137_13
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15273..17450
DNA (2178bp) protein (726aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXB7_BACPM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDY96052.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
putative beta-galactosidase
L2_038_000M1_scaffold_137_14
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17524..18522
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXD4_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96069.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Sialic acid-specific 9-O-acetylesterase
L2_038_000M1_scaffold_137_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18519..20735
DNA (2217bp) protein (739aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXD5_BACPM
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:EDY96070.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L2_038_000M1_scaffold_137_16
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21268..22833
DNA (1566bp) protein (522aa)
type I restriction-modification system methyltransferase subunit like protein (EC:2.1.1.72)
Putative type I restriction-modification system M subunit n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZRY3_9BACE
Putative type I restriction-modification system M subunit {ECO:0000313|EMBL:CDD48835.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
L2_038_000M1_scaffold_137_17
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22820..23821
DNA (1002bp) protein (334aa)
Death-on-curing family protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AW08_9BACE
Death-on-curing family protein {ECO:0000313|EMBL:CDD48837.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
death-on-curing family protein
L2_038_000M1_scaffold_137_18
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23814..24944
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI000373759A
Type I restriction-modification system specificity determinant {ECO:0000313|EMBL:CDD48840.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L2_038_000M1_scaffold_137_19
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24956..25612
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZZR0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD48849.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L2_038_000M1_scaffold_137_20
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25620..26402
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZRZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD48850.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L2_038_000M1_scaffold_137_21
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26412..29591
DNA (3180bp) protein (1060aa)
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease HsdR family n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AWL1_9BACE
Type I site-specific deoxyribonuclease HsdR family {ECO:0000313|EMBL:CDD48852.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
L2_038_000M1_scaffold_137_22
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29666..31039
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXE8_BACPM
MATE efflux family protein {ECO:0000313|EMBL:EDY96083.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
putative efflux protein, MATE family
L2_038_000M1_scaffold_137_23
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31099..32652)
DNA (1554bp) protein (518aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Bacteroides RepID=B5CXE9_BACPM
L2_038_000M1_scaffold_137_24
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32821..33255
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Putative Holliday junction resolvase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W1B3_9BACE
Holliday junction resolvase
L2_038_000M1_scaffold_137_25
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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33277..33831
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7L0_9BACE
L2_038_000M1_scaffold_137_26
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33828..35831
DNA (2004bp) protein (668aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF2_BACPM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDY96087.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L2_038_000M1_scaffold_137_27
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35906..37846
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Threonine--tRNA ligase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VSP5_9BACE
threonyl-tRNA synthetase
L2_038_000M1_scaffold_137_28
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37948..38529
DNA (582bp) protein (194aa)
Translation initiation factor IF-3 n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W1B5_9BACE
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
infC; translation initiation factor IF-3
L2_038_000M1_scaffold_137_29
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


38600..38797
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXF5_BACPM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
50S ribosomal protein L35
L2_038_000M1_scaffold_137_30
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


38907..39257
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=4 Tax=Bacteroides RepID=B5CXF6_BACPM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
rplT; 50S ribosomal protein L20
Displaying items 1-30 of 204 in total

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