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L2_038_000M1_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_155_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..875)
DNA (873bp) protein (291aa)
Putative permease n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCK3_9FIRM
Putative permease {ECO:0000313|EMBL:CDE35927.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
permease
L2_038_000M1_scaffold_155_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(872..1168)
DNA (297bp) protein (99aa)
Transcriptional regulator ArsR family n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAF0_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDE35928.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Predicted transcriptional regulators
L2_038_000M1_scaffold_155_3
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1392..1589)
DNA (198bp) protein (66aa)
ParB-like partition protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LBA2_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:CDB80829.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
ParB-like partition proteins
L2_038_000M1_scaffold_155_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1586..1759)
DNA (174bp) protein (58aa)
ParB-like partition proteins n=3 Tax=Clostridiales RepID=D4JJA8_9FIRM
ParB-like partition proteins
ParB-like partition protein {ECO:0000313|EMBL:AEN97287.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_038_000M1_scaffold_155_5
unknown

Not on your lists

comp(1871..2146)
DNA (276bp) protein (92aa)

This feature has no annotations

L2_038_000M1_scaffold_155_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2113..3546)
DNA (1434bp) protein (478aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9A2_9CLOT
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CDD74297.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_038_000M1_scaffold_155_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3552..4496)
DNA (945bp) protein (315aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAH5_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDD74298.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
metal dependent phosphohydrolase
L2_038_000M1_scaffold_155_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4517..5239)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C825_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74299.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_155_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5378..5527)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8Q2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74300.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_038_000M1_scaffold_155_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6734..9097
DNA (2364bp) protein (788aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Endonuclease MutS2 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C987_9CLOT
MutS2 family protein
L2_038_000M1_scaffold_155_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9140..9835
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75067.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_038_000M1_scaffold_155_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9846..11255
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAC0_9CLOT
Signal transduction histidine kinase
L2_038_000M1_scaffold_155_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11266..12936)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75065.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_038_000M1_scaffold_155_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12920..13447)
DNA (528bp) protein (176aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA58_9CLOT
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDD75064.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RNA polymerase sigma factor, sigma-70 family
L2_038_000M1_scaffold_155_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13539..14045)
DNA (507bp) protein (169aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CCL2_9CLOT
tRNA/rRNA methyltransferase SpoU
L2_038_000M1_scaffold_155_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14047..14523)
DNA (477bp) protein (159aa)
CheC domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBF7_9CLOT
CheC domain protein {ECO:0000313|EMBL:CDD75062.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
chemotaxis protein CheC
L2_038_000M1_scaffold_155_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14566..15723)
DNA (1158bp) protein (386aa)
Aminotransferase class I/II n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAB6_9CLOT
Aminotransferase class I/II {ECO:0000313|EMBL:CDD75061.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
class I and II aminotransferase
L2_038_000M1_scaffold_155_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15720..16220)
DNA (501bp) protein (167aa)
Transcriptional regulator AsnC family n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAT4_9CLOT
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDD75060.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
AsnC family transcriptional regulator
L2_038_000M1_scaffold_155_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16241..17224)
DNA (984bp) protein (328aa)
Hydrogenase maturation factor n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA53_9CLOT
Hydrogenase maturation factor {ECO:0000313|EMBL:CDD75059.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Hydrogenase maturation factor
L2_038_000M1_scaffold_155_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17254..18807)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CCK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75058.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Uncharacterized vancomycin resistance protein
L2_038_000M1_scaffold_155_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18877..18969)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75057.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_038_000M1_scaffold_155_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19003..19623
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75056.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_155_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19607..21370)
DNA (1764bp) protein (588aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAS6_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CDD75055.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
radical SAM protein
L2_038_000M1_scaffold_155_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21843..22742)
DNA (900bp) protein (300aa)
Cation efflux family protein n=2 Tax=root RepID=R7CCK2_9CLOT
Cation efflux family protein {ECO:0000313|EMBL:CDD75053.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cation diffusion facilitator family transporter
L2_038_000M1_scaffold_155_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22721..24772)
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75052.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
glycoside hydrolase family 13 protein
L2_038_000M1_scaffold_155_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25066..26907)
DNA (1842bp) protein (614aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAA7_9CLOT
ATP-dependent metalloprotease FtsH
L2_038_000M1_scaffold_155_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26912..27442)
DNA (531bp) protein (177aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAR9_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDD75050.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_038_000M1_scaffold_155_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27414..28832)
DNA (1419bp) protein (473aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3A4_9FIRM
L2_038_000M1_scaffold_155_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28877..31204)
DNA (2328bp) protein (776aa)
serine phosphatase (EC:3.1.3.16)
Stage II sporulation protein E protein serine/threonine phosphatase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA80_9CLOT
Stage II sporulation protein E protein serine/threonine phosphatase {ECO:0000313|EMBL:CDD75021.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_038_000M1_scaffold_155_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31341..31628)
DNA (288bp) protein (96aa)
Septum formation initiator n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA13_9CLOT
Septum formation initiator {ECO:0000313|EMBL:CDD75019.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Septum formation initiator.
Displaying items 1-30 of 102 in total

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