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L2_038_000M1_scaffold_171

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_171_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

196..1092
DNA (897bp) protein (299aa)
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9N5_9CLOT
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CDD74791.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L2_038_000M1_scaffold_171_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1115..4261
DNA (3147bp) protein (1049aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74792.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Fibronectin type III domain./PT repeat.
L2_038_000M1_scaffold_171_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4549..4857
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBY0_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
LSU ribosomal protein L21P
L2_038_000M1_scaffold_171_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4874..5194
DNA (321bp) protein (107aa)
Predicted ribosomal protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H3_9CLOT
Predicted ribosomal protein {ECO:0000313|EMBL:CDD74794.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Predicted ribosomal protein
L2_038_000M1_scaffold_171_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5207..5494
DNA (288bp) protein (96aa)
50S ribosomal protein L27 n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA46_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
rpmA; 50S ribosomal protein L27
L2_038_000M1_scaffold_171_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5525..6856
DNA (1332bp) protein (444aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9N9_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Obg family GTPase CgtA
L2_038_000M1_scaffold_171_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6891..7346
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74797.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_171_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7355..8551
DNA (1197bp) protein (399aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBY2_9CLOT
nicotinate (nicotinamide) nucleotide adenylyltransferase/conserved hypothetical protein TIGR00488
L2_038_000M1_scaffold_171_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8571..8924
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H6_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
iojap-related protein
L2_038_000M1_scaffold_171_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9055..9669)
DNA (615bp) protein (205aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA49_9CLOT
L2_038_000M1_scaffold_171_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9845..10615
DNA (771bp) protein (257aa)
Mucin n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9P4_9CLOT
Mucin {ECO:0000313|EMBL:CDD74801.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_171_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10648..13293
DNA (2646bp) protein (882aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAR5_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
DNA mismatch repair protein MutS
L2_038_000M1_scaffold_171_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13312..15123
DNA (1812bp) protein (604aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBY7_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
DNA mismatch repair protein MutL
L2_038_000M1_scaffold_171_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15147..16103
DNA (957bp) protein (319aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H9_9CLOT
L2_038_000M1_scaffold_171_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16107..17396
DNA (1290bp) protein (430aa)
Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA54_9CLOT
Cystathionine beta-lyase family protein involved in aluminum resistance {ECO:0000313|EMBL:CDD74805.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L2_038_000M1_scaffold_171_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17515..18213
DNA (699bp) protein (233aa)
DNA repair protein RadC n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9P8_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:CDD74806.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
DNA repair protein RadC
L2_038_000M1_scaffold_171_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18215..19207
DNA (993bp) protein (331aa)
Cell shape determining protein MreB/Mrl n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAS0_9CLOT
Cell shape determining protein MreB/Mrl {ECO:0000313|EMBL:CDD74807.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
rod shape-determining protein MreB
L2_038_000M1_scaffold_171_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19239..20114
DNA (876bp) protein (292aa)
Cell shape-determining protein MreC n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBZ0_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
rod shape-determining protein MreC
L2_038_000M1_scaffold_171_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20107..20613
DNA (507bp) protein (169aa)
Rod shape-determining protein MreD n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9I3_9CLOT
Rod shape-determining protein MreD {ECO:0000313|EMBL:CDD74809.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_171_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20617..23469
DNA (2853bp) protein (951aa)
Penicillin-binding protein transpeptidase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA59_9CLOT
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:CDD74810.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
penicillin-binding protein transpeptidase
L2_038_000M1_scaffold_171_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23482..24147
DNA (666bp) protein (222aa)
Probable septum site-determining protein MinC n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Q0_9CLOT
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
septum site-determining protein MinC
L2_038_000M1_scaffold_171_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24189..24977
DNA (789bp) protein (263aa)
Site-determining protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAS2_9CLOT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
septum site-determining protein MinD
L2_038_000M1_scaffold_171_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24992..25267
DNA (276bp) protein (92aa)
Cell division topological specificity factor n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBZ2_9CLOT
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cell division topological specificity factor MinE
L2_038_000M1_scaffold_171_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25294..26451
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9I6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74814.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cell cycle protein
L2_038_000M1_scaffold_171_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26476..26874
DNA (399bp) protein (133aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA62_9CLOT
L2_038_000M1_scaffold_171_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26914..27108)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74816.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_171_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27208..28593
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74817.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_171_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28633..29322
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74818.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
alanine racemase
L2_038_000M1_scaffold_171_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29300..29842
DNA (543bp) protein (181aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9J0_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_038_000M1_scaffold_171_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29845..30612
DNA (768bp) protein (256aa)
S4 domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA65_9CLOT
S4 domain protein {ECO:0000313|EMBL:CDD74820.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Uncharacterized conserved protein, contains S4-like domain
Displaying items 1-30 of 89 in total

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