ggKbase home page

L2_038_000M1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_174_1
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2..691
DNA (690bp) protein (230aa)
30S ribosomal protein S2 n=4 Tax=Bacteroides RepID=B0NWB6_BACSE
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
30S ribosomal protein S2
L2_038_000M1_scaffold_174_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

818..1810
DNA (993bp) protein (331aa)
Elongation factor Ts n=3 Tax=Bacteroides RepID=B0NWB5_BACSE
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
translation elongation factor Ts (EF-Ts)
L2_038_000M1_scaffold_174_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1901..2260)
DNA (360bp) protein (120aa)
Translation initiation factor 1 n=2 Tax=Bacteroides stercoris RepID=S3YT69_BACSE
Putative translation initiation factor SUI1 {ECO:0000313|EMBL:EDS13616.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative translation initiation factor SUI1
L2_038_000M1_scaffold_174_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2430..3086
DNA (657bp) protein (219aa)
Redox-sensing transcriptional repressor Rex n=3 Tax=Bacteroides RepID=B0NWB3_BACSE
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
CoA-binding domain protein
L2_038_000M1_scaffold_174_5
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3086..3703
DNA (618bp) protein (206aa)
FAH family protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AL64_9BACE
FAH family protein {ECO:0000313|EMBL:CDA47271.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
fumarylacetoacetate (FAA) hydrolase
L2_038_000M1_scaffold_174_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3863..4342
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Bacteroides RepID=B0NWB1_BACSE
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L2_038_000M1_scaffold_174_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4373..5392
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCR5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20799.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
metallophosphoesterase
L2_038_000M1_scaffold_174_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5393..6751)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YT63_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20798.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
glycoside hydrolase family 28
L2_038_000M1_scaffold_174_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6855..7706)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGQ2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20797.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L2_038_000M1_scaffold_174_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7743..8798)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YEN1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20796.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
phosphate-selective porin O and P
L2_038_000M1_scaffold_174_11
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8986..10068
DNA (1083bp) protein (361aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Bacteroides RepID=R6A8E3_9BACE
L2_038_000M1_scaffold_174_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10085..11458
DNA (1374bp) protein (458aa)
Peptidase S8/S53 family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AEQ1_9BACE
Peptidase S8/S53 family {ECO:0000313|EMBL:CDA47264.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
peptidase S8/S53
L2_038_000M1_scaffold_174_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11491..12738
DNA (1248bp) protein (416aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exonuclease VII large subunit n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A5U0_9BACE
L2_038_000M1_scaffold_174_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12747..12956
DNA (210bp) protein (70aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NW64_BACSE
Exonuclease VII small subunit
L2_038_000M1_scaffold_174_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13114..13602
DNA (489bp) protein (163aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=B0NW63_BACSE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDS13565.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L2_038_000M1_scaffold_174_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13683..14828
DNA (1146bp) protein (382aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=B0NW62_BACSE
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDA47258.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Fe2+-dicitrate sensor, membrane component
L2_038_000M1_scaffold_174_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14987..18571
DNA (3585bp) protein (1195aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides stercoris RepID=B0NW61_BACSE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS13563.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L2_038_000M1_scaffold_174_18
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18593..20167
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AL53_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA47256.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L2_038_000M1_scaffold_174_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20196..21077
DNA (882bp) protein (294aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NW59_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20787.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L2_038_000M1_scaffold_174_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21090..22385
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NW58_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13560.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L2_038_000M1_scaffold_174_21
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22410..24215
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A5T2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA47253.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L2_038_000M1_scaffold_174_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24239..26128
DNA (1890bp) protein (630aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NW56_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13558.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L2_038_000M1_scaffold_174_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26178..27629
DNA (1452bp) protein (484aa)
Clostripain family n=2 Tax=Bacteroides stercoris RepID=B0NW55_BACSE
Clostripain family {ECO:0000313|EMBL:EDS13557.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
clostripain-like protein
L2_038_000M1_scaffold_174_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28271..29290
DNA (1020bp) protein (340aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EDS13555.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EDS13555.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=3 Tax=Bacteroides RepID=B0NW53_BACSE
L2_038_000M1_scaffold_174_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29294..30100
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YEL8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20781.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
putative hydrolase
L2_038_000M1_scaffold_174_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30110..30868
DNA (759bp) protein (253aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZJ86_BACSE
putative methyltransferase
L2_038_000M1_scaffold_174_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30972..32645
DNA (1674bp) protein (558aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Bacteroides stercoris CC31F RepID=S3YCP6_BACSE
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EPH20779.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L2_038_000M1_scaffold_174_28
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32913..34013
DNA (1101bp) protein (367aa)
ATP-binding protein, Mrp/Nbp35 family n=3 Tax=Bacteroides RepID=B0NW50_BACSE
ATP-binding protein Mrp/Nbp35 family {ECO:0000313|EMBL:CDA48353.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Mrp/Nbp35 family ATP-binding protein
L2_038_000M1_scaffold_174_29
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34067..35614
DNA (1548bp) protein (516aa)
Alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
Oxidoreductase NAD-binding domain protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B4S3_9BACE
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDA48352.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L2_038_000M1_scaffold_174_30
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35711..36826
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AP31_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48351.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
Displaying items 1-30 of 94 in total

View Taxonomy