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L2_038_000M1_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_235_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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216..1526
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T524_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67320.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
putative secreted protein
L2_038_000M1_scaffold_235_2
unknown

Not on your lists

comp(1599..2282)
DNA (684bp) protein (228aa)

This feature has no annotations

L2_038_000M1_scaffold_235_3

Not on your lists

comp(2284..3033)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF62_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61966.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_038_000M1_scaffold_235_4

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comp(3030..3893)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF61_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61965.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ABC transporter
L2_038_000M1_scaffold_235_5

Not on your lists

comp(3886..4257)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF60_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61964.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
GntR family transcriptional regulator
L2_038_000M1_scaffold_235_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4692..7100)
DNA (2409bp) protein (803aa)
Glycoside Hydrolase Family 94 protein. Formerly known as glycosyltransferase family GT36 (EC:2.4.1.-)
Putative carbohydrate-active enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1H6_9FIRM
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:CDC67318.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_235_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7445..8470
DNA (1026bp) protein (342aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03813.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8487..9047
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THP6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03812.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9112..9393)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T578_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03811.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9627..11132)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCF1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03809.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11152..12876)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67383.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_038_000M1_scaffold_235_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12892..13596)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9A6_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC67382.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_235_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13596..14573)
DNA (978bp) protein (326aa)
ABC transporter ATPase component (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67381.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_235_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14855..16303)
DNA (1449bp) protein (483aa)
gltX; Glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Glutamate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T573_9FIRM
L2_038_000M1_scaffold_235_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16391..16870)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCE7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03804.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16867..17796)
DNA (930bp) protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ribF; Riboflavin kinase / FMN adenylyltransferase (EC:2.7.7.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1P9_9FIRM
L2_038_000M1_scaffold_235_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17823..18737)
DNA (915bp) protein (305aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.12)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CCO03802.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
tRNA pseudouridine synthase B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U999_9FIRM
L2_038_000M1_scaffold_235_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18737..19684)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THN1_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03801.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19703..20059)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T568_9FIRM
rbfA; Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20149..22659)
DNA (2511bp) protein (837aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCE4_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
infB; Translation initiation factor IF-2
L2_038_000M1_scaffold_235_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22694..23026)
DNA (333bp) protein (111aa)
Ribosomal protein L7Ae n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1P4_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03798.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23019..23291)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U993_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO03797.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23278..24408)
DNA (1131bp) protein (377aa)
NusA antitermination factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THM7_9FIRM
nusA; Transcription termination factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24428..24922)
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T563_9FIRM
conserved hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25138..25536)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCD9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03794.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25576..26493)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1N7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03793.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_235_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26616..27251)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U988_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67367.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_235_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27296..28516
DNA (1221bp) protein (407aa)
alr; Alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CCO03791.1}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000313|EMBL:CCO03791.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Alanine racemase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THM0_9FIRM
L2_038_000M1_scaffold_235_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28533..29810
DNA (1278bp) protein (426aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T559_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDC67365.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_038_000M1_scaffold_235_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29910..30674)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCD5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO03789.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 66 in total

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