ggKbase home page

L2_038_000M1_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_268_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(132..1067)
DNA (936bp) protein (312aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGM1_9ACTN
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDA35714.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L2_038_000M1_scaffold_268_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1204..2091)
DNA (888bp) protein (296aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Methionine aminopeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7P8_9ACTN
Map; methionine aminopeptidase
L2_038_000M1_scaffold_268_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2252..3028)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E950_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39795.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
radical SAM domain-containing protein
L2_038_000M1_scaffold_268_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3254..4051
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMY3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35711.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
alpha/beta hydrolase fold protein
L2_038_000M1_scaffold_268_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4263..6143
DNA (1881bp) protein (627aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E952_9ACTN
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EBA39797.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
conserved hypothetical protein
L2_038_000M1_scaffold_268_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6168..6524
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E953_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39798.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_038_000M1_scaffold_268_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6630..7439)
DNA (810bp) protein (270aa)
Peptidase C26 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E954_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74554.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptidase C26
L2_038_000M1_scaffold_268_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7528..8292)
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E955_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39800.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter ATP-binding protein
L2_038_000M1_scaffold_268_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8329..9162)
DNA (834bp) protein (278aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E956_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39801.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter
L2_038_000M1_scaffold_268_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9159..9818)
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E957_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39802.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter
L2_038_000M1_scaffold_268_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9957..10952)
DNA (996bp) protein (332aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E958_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39803.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter substrate-binding protein
L2_038_000M1_scaffold_268_12
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11222..12424
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D957_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86032.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
iron-containing alcohol dehydrogenase
L2_038_000M1_scaffold_268_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12728..14509)
DNA (1782bp) protein (594aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7N6_9ACTN
L2_038_000M1_scaffold_268_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14738..15295
DNA (558bp) protein (186aa)
HD domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3J2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74548.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
metal dependent phosphohydrolase
L2_038_000M1_scaffold_268_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15299..16318
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMX5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35701.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_038_000M1_scaffold_268_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16579..17436
DNA (858bp) protein (286aa)
HAD hydrolase family IIB n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7N1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74543.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HAD-superfamily hydrolase
L2_038_000M1_scaffold_268_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17908..18033
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3I7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35697.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_038_000M1_scaffold_268_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18309..19019
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZMX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35696.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
TetR family transcriptional regulator
L2_038_000M1_scaffold_268_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19031..23815
DNA (4785bp) protein (1595aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA20_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74541.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
CoA-substrate-specific enzyme activase
L2_038_000M1_scaffold_268_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24312..24761
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E977_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39822.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_038_000M1_scaffold_268_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24889..25944)
DNA (1056bp) protein (352aa)
Hydrophobic domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E978_9ACTN
Hydrophobic domain protein {ECO:0000313|EMBL:EBA39824.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_038_000M1_scaffold_268_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26335..29844
DNA (3510bp) protein (1170aa)
SCP-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E980_9ACTN
SCP-like protein {ECO:0000313|EMBL:EBA39825.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
TPR repeat-containing protein
L2_038_000M1_scaffold_268_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30046..31749)
DNA (1704bp) protein (568aa)
Putative oligopeptide transporter OPT family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z725_9ACTN
Putative oligopeptide transporter OPT family {ECO:0000313|EMBL:CDA35488.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
oligopeptide transporter
L2_038_000M1_scaffold_268_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31942..32793
DNA (852bp) protein (284aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Type III pantothenate kinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZG20_9ACTN
transcriptional activator, Baf family
L2_038_000M1_scaffold_268_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32878..33402
DNA (525bp) protein (175aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E983_9ACTN
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EBA39828.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
deoxycytidylate deaminase
L2_038_000M1_scaffold_268_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33574..33852
DNA (279bp) protein (93aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZME7_9ACTN
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:CDA35491.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nitrogen-fixing NifU domain-containing protein
L2_038_000M1_scaffold_268_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33962..34783
DNA (822bp) protein (274aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2X7_9ACTN
prolipoprotein diacylglyceryl transferase
L2_038_000M1_scaffold_268_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34919..37102
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z731_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74691.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_038_000M1_scaffold_268_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37267..38073
DNA (807bp) protein (269aa)
Probable transcriptional regulatory protein COLAER_00981 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E989_9ACTN
Probable transcriptional regulatory protein COLAER_00981 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_038_000M1_scaffold_268_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38240..38785
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9I6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35495.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
Displaying items 1-30 of 60 in total

View Taxonomy