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L2_038_000M1_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_277_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Permease protein of ABC transporter system n=7 Tax=Bifidobacterium bifidum RepID=E3EQG5_BIFBS
ABC transporter permease
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFE88644.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_038_000M1_scaffold_277_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(535..816)
DNA (282bp) protein (94aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WJH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53620.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_277_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(993..2090)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=U2CFV7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53619.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_277_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2087..2689)
DNA (603bp) protein (201aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter-related protein n=5 Tax=Bifidobacterium bifidum RepID=E3EQG2_BIFBS
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF14872.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_038_000M1_scaffold_277_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2679..3731)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2DPC3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83437.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_038_000M1_scaffold_277_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3787..4449)
DNA (663bp) protein (221aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WJH2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43787.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_038_000M1_scaffold_277_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4638..5294
DNA (657bp) protein (219aa)
Response regulator receiver n=6 Tax=Bifidobacterium bifidum RepID=E3EQF9_BIFBS
response regulator
Response regulator receiver {ECO:0000313|EMBL:KFI43786.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_038_000M1_scaffold_277_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5291..6577
DNA (1287bp) protein (429aa)
histidine-kinase (EC:2.7.13.3)
Putative histidine-kinase {ECO:0000313|EMBL:KFI43785.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFI43785.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Histidine kinase n=2 Tax=Bifidobacterium bifidum RepID=E3EQF8_BIFBS
L2_038_000M1_scaffold_277_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6763..7764
DNA (1002bp) protein (334aa)
HTH-type transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPL6_BIFBI
lacR; HTH-type transcriptional regulator
HTH-type transcriptional regulator {ECO:0000313|EMBL:EKE50670.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_038_000M1_scaffold_277_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7755..8258)
DNA (504bp) protein (168aa)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQF6_BIFBS
nagA2; N-acetylglucosamine-6-phosphate deacetylase
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:ADO53612.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_277_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8277..11435)
DNA (3159bp) protein (1053aa)
lacZ6; beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
LacZ6 Beta-galactosidase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYP1_BIFBP
L2_038_000M1_scaffold_277_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11801..13276
DNA (1476bp) protein (492aa)
Lactose permease n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H725_BIFBI
Lactose permease {ECO:0000313|EMBL:EKE49771.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
lacS; galactoside symporter
L2_038_000M1_scaffold_277_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13194..13790)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H6G0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB21877.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_038_000M1_scaffold_277_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13895..14506
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2CFQ3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI43780.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
transcriptional regulator
L2_038_000M1_scaffold_277_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14592..15503)
DNA (912bp) protein (304aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJG3_BIFBI
trmB; tRNA (guanine-N(7)-)-methyl transferase
L2_038_000M1_scaffold_277_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15697..16710
DNA (1014bp) protein (338aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=2 Tax=Bifidobacterium bifidum RepID=E4VBY0_BIFBI
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ERI83378.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_277_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17005..17703
DNA (699bp) protein (233aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=K2M5J7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98659.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_277_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19069..20220
DNA (1152bp) protein (384aa)
Lactaldehyde reductase n=7 Tax=Bifidobacterium RepID=E3EQE6_BIFBS
fucO; Lactaldehyde reductase
L-1,2-propanediol oxidoreductase {ECO:0000313|EMBL:BAQ98657.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_277_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20391..21290)
DNA (900bp) protein (300aa)
glycosyltransferase (EC:2.4.1.226)
Glycosyltransferase, family 2 n=3 Tax=Bifidobacterium bifidum RepID=E3EQE5_BIFBS
Glycosyltransferase, family 2 {ECO:0000313|EMBL:ADO53601.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_277_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21344..22948
DNA (1605bp) protein (535aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2HTX2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83383.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_038_000M1_scaffold_277_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22948..24171
DNA (1224bp) protein (408aa)
N-acetylglucosaminyltransferase n=7 Tax=Bifidobacterium RepID=E3EQE3_BIFBS
pgaC; biofilm PGA synthesis N-glycosyl transferase
Biofilm PGA synthesis N-glycosyl transferase {ECO:0000313|EMBL:EKF16335.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_038_000M1_scaffold_277_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24310..25239
DNA (930bp) protein (310aa)
ABC type transport system, ATP-binding protein n=7 Tax=Bifidobacterium bifidum RepID=E3EQE2_BIFBS
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAQ98653.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI83385.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_277_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25239..26894
DNA (1656bp) protein (552aa)
Putative integral membrane transport protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJF3_BIFBI
Putative integral membrane transport protein {ECO:0000313|EMBL:AFL05016.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
putative integral membrane transport protein
L2_038_000M1_scaffold_277_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27001..28416
DNA (1416bp) protein (472aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQE0_BIFBS
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:ADO53596.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_277_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28429..29547
DNA (1119bp) protein (373aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJF1_BIFBI
tilS; tRNA(Ile)-lysidine synthase
L2_038_000M1_scaffold_277_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29525..30091
DNA (567bp) protein (189aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFR51105.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFR51105.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hpt; hypoxanthine phosphoribosyl transferase (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase n=8 Tax=Bifidobacterium RepID=E3EQD8_BIFBS
L2_038_000M1_scaffold_277_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30125..32191
DNA (2067bp) protein (689aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
ATP-dependent zinc metalloprotease FtsH n=5 Tax=Bifidobacterium RepID=I3WJE9_BIFBI
ftsH; cell division protease
L2_038_000M1_scaffold_277_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32332..32898
DNA (567bp) protein (189aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
GTP cyclohydrolase 1 n=8 Tax=Bifidobacterium RepID=E3EQD6_BIFBS
L2_038_000M1_scaffold_277_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32964..33836
DNA (873bp) protein (291aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Dihydropteroate synthase n=3 Tax=Bifidobacterium RepID=E3EQD5_BIFBS
folP; dihydropteroate synthase
L2_038_000M1_scaffold_277_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33919..35433
DNA (1515bp) protein (505aa)
sulD; dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=4 Tax=Bifidobacterium bifidum RepID=E3EQD4_BIFBS
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ADO53590.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying items 1-30 of 63 in total

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