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L2_038_000M1_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_281_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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236..1279
DNA (1044bp) protein (348aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Tetraacyldisaccharide 4'-kinase n=2 Tax=Alistipes RepID=D4INA7_9BACT
L2_038_000M1_scaffold_281_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1263..2069
DNA (807bp) protein (269aa)
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Purine nucleoside phosphorylase n=2 Tax=Alistipes RepID=D4INA6_9BACT
L2_038_000M1_scaffold_281_3
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2074..2580
DNA (507bp) protein (169aa)
Single-stranded DNA-binding protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXJ7_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
single stranded DNA-binding protein
L2_038_000M1_scaffold_281_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2758..3507)
DNA (750bp) protein (250aa)
Response regulator of the LytR/AlgR family n=2 Tax=Alistipes RepID=D4INA5_9BACT
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK64417.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_281_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3599..4972)
DNA (1374bp) protein (458aa)
RagB/SusD domain-containing protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002891FAE
SusD family {ECO:0000313|EMBL:CCZ97220.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
SusD family.
L2_038_000M1_scaffold_281_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4985..8359)
DNA (3375bp) protein (1125aa)
TonB-dependent Receptor Plug Domain./TonB dependent receptor n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXJ2_9BACT
TonB-dependent Receptor Plug Domain./TonB dependent receptor {ECO:0000313|EMBL:CCZ97217.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
L2_038_000M1_scaffold_281_7
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8511..11114)
DNA (2604bp) protein (868aa)
metalloprotease n=1 Tax=Alistipes sp. JC136 RepID=UPI0002882095
Metalloprotease {ECO:0000313|EMBL:KIO47593.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L2_038_000M1_scaffold_281_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11264..12805)
DNA (1542bp) protein (514aa)
Signal transduction histidine kinase LytS n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAS5_9BACT
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:CCZ97214.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
signal transduction histidine kinase, LytS
L2_038_000M1_scaffold_281_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12878..13612)
DNA (735bp) protein (245aa)
Short-chain dehydrogenases of various substrate specificities n=1 Tax=Alistipes shahii WAL 8301 RepID=D4INA2_9BACT
Short-chain dehydrogenases of various substrate specificities
Short-chain dehydrogenases of various substrate specificities {ECO:0000313|EMBL:CBK64414.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_281_10
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13609..14037)
DNA (429bp) protein (143aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Deoxycytidylate deaminase n=2 Tax=root RepID=R6VUT4_9BACT
Deoxycytidylate deaminase {ECO:0000313|EMBL:CDC95876.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L2_038_000M1_scaffold_281_11
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14083..17376)
DNA (3294bp) protein (1098aa)
Protein translocase subunit SecA n=2 Tax=Alistipes RepID=D4IN99_9BACT
protein translocase subunit secA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_038_000M1_scaffold_281_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17443..18393)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAS1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97209.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Protein of unknown function (DUF2851).
L2_038_000M1_scaffold_281_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18395..18715)
DNA (321bp) protein (107aa)
putative metal-sulfur cluster biosynthetic enzyme n=1 Tax=Alistipes sp. JC136 RepID=UPI0002894DBD
Predicted metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:CCZ97208.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Predicted metal-sulfur cluster biosynthetic enzyme
L2_038_000M1_scaffold_281_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18747..19163)
DNA (417bp) protein (139aa)
Cysteine desulfuration protein SufE n=2 Tax=Alistipes RepID=D4IN96_9BACT
Cysteine desulfuration protein SufE
Cysteine desulfuration protein SufE {ECO:0000313|EMBL:CCZ97207.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_038_000M1_scaffold_281_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19191..20756)
DNA (1566bp) protein (522aa)
Putative AP superfamily protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WMQ0_9BACT
Putative AP superfamily protein {ECO:0000313|EMBL:CCZ97206.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
AP superfamily protein
L2_038_000M1_scaffold_281_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20781..21746)
DNA (966bp) protein (322aa)
GSCFA family n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IN95_9BACT
GSCFA family.
GSCFA family {ECO:0000313|EMBL:CBK64407.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_281_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21783..22595
DNA (813bp) protein (271aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAR6_9BACT
L2_038_000M1_scaffold_281_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22630..23592)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XTZ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25110.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_038_000M1_scaffold_281_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23621..24064)
DNA (444bp) protein (148aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase {ECO:0000313|EMBL:CBK64405.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CBK64405.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Ribose-5-phosphate isomerase n=2 Tax=Alistipes RepID=D4IN93_9BACT
L2_038_000M1_scaffold_281_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24103..24525
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXH8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97202.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_038_000M1_scaffold_281_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24535..25167)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289A4A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64345.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_281_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(25394..26350)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L570_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40834.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_038_000M1_scaffold_281_23
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26796..27110)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI0002896F26
Uncharacterized protein {ECO:0000313|EMBL:CDC96263.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
L2_038_000M1_scaffold_281_24
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27113..28915)
DNA (1803bp) protein (601aa)
GTP-binding protein TypA/BipA n=1 Tax=Alistipes sp. CAG:53 RepID=R5W3I5_9BACT
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CCZ97200.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
GTP-binding protein TypA/BipA
L2_038_000M1_scaffold_281_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28996..30009
DNA (1014bp) protein (338aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAR2_9BACT
L2_038_000M1_scaffold_281_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30090..31379)
DNA (1290bp) protein (430aa)
Malic enzyme n=1 Tax=Alistipes sp. CAG:53 RepID=R5W246_9BACT
Malic enzyme {ECO:0000313|EMBL:CCZ97198.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Malic enzyme
L2_038_000M1_scaffold_281_27
unknown

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comp(31470..31808)
DNA (339bp) protein (113aa)

This feature has no annotations

L2_038_000M1_scaffold_281_28
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31878..32885)
DNA (1008bp) protein (336aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Alistipes RepID=D4IN29_9BACT
Holliday junction DNA helicase subunit RuvB
L2_038_000M1_scaffold_281_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33104..33823)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IN28_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64340.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_281_30
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33945..34499
DNA (555bp) protein (185aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Alistipes RepID=D4IN27_9BACT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCZ96256.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RNA polymerase sigma factor, sigma-70 family
Displaying items 1-30 of 59 in total

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