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L2_038_000M1_scaffold_337

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_337_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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195..1355
DNA (1161bp) protein (387aa)
Glycerol dehydrogenase and related enzymes n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C8B3_9FIRM
putative alcohol dehydrogenase
Putative alcohol dehydrogenase {ECO:0000313|EMBL:CCO04376.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_2
unknown

Not on your lists

comp(1300..1770)
DNA (471bp) protein (157aa)

This feature has no annotations

L2_038_000M1_scaffold_337_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1794..2741)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65049.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_038_000M1_scaffold_337_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2738..3982)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65050.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_038_000M1_scaffold_337_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4122..5357
DNA (1236bp) protein (412aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
RNA-splicing ligase RtcB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB46_9FIRM
conserved hypothetical protein
L2_038_000M1_scaffold_337_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5370..5822
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2M5_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04381.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6185..7384)
DNA (1200bp) protein (400aa)
Transporter CPA2 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV21_9FIRM
putative sodium/hydrogen ion antiporter
Putative sodium/hydrogen ion antiporter {ECO:0000313|EMBL:CCO04382.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7545..9725)
DNA (2181bp) protein (727aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5P7_9FIRM
ABC transporter permease/ATP-binding protein
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CCO04383.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9761..10303)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYM4_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04384.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10320..12590)
DNA (2271bp) protein (757aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB50_9FIRM
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CCO04385.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter permease/ATP-binding protein
L2_038_000M1_scaffold_337_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12755..12871)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65057.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_337_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12966..14462)
DNA (1497bp) protein (499aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV23_9FIRM
putative transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_337_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14730..15683)
DNA (954bp) protein (318aa)
scrK; 6-phosphofructokinase (ATP) (EC:2.7.1.4)
Putative fructokinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWC0_9FIRM
Putative fructokinase {ECO:0000313|EMBL:CDC65468.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_337_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15698..17068)
DNA (1371bp) protein (457aa)
scrB; sucrose-6-phosphate hydrolase (Glycoside Hydrolase Family 32 protein) (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65467.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_337_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17124..19028)
DNA (1905bp) protein (635aa)
PTS system, sucrose-specific IIABC component {ECO:0000313|EMBL:CCO04389.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCO04389.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
scrA; PTS system, sucrose-specific IIABC component (EC:2.7.1.69)
PTS system glucose subfamily IIA component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC91_9FIRM
L2_038_000M1_scaffold_337_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19194..20195)
DNA (1002bp) protein (334aa)
Transcriptional regulator LacI family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZR5_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDC65465.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
scrR; sucrose operon repressor
L2_038_000M1_scaffold_337_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20335..21687)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KP73_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
Multidrug resistance protein, MATE family,drug/sodium antiporter {ECO:0000313|EMBL:CCO04391.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21680..24364)
DNA (2685bp) protein (895aa)
Glycosyl hydrolase family 59 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T699_9FIRM
Glycoside Hydrolase Family 59 protein (Possibly a Galactocerebrosidase) {ECO:0000313|EMBL:CCO04392.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Glycoside Hydrolase Family 59 protein (possibly a Galactocerebrosidase)
L2_038_000M1_scaffold_337_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24525..25343)
DNA (819bp) protein (273aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SVL1_9FIRM
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCO04393.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25595..26716)
DNA (1122bp) protein (374aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBP2_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDC65266.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
putative metallophosphoesterase
L2_038_000M1_scaffold_337_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26889..27602
DNA (714bp) protein (238aa)
Acyl-ACP thioesterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T693_9FIRM
acyl-ACP thioesterase
Acyl-ACP thioesterase {ECO:0000313|EMBL:CCO04397.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27767..28699
DNA (933bp) protein (311aa)
cysK; Cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CCO04398.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Cysteine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U341_9FIRM
L2_038_000M1_scaffold_337_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28906..30144)
DNA (1239bp) protein (413aa)
Transglutaminase domain-containing protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBM7_9FIRM
Transglutaminase domain-containing protein {ECO:0000313|EMBL:CDC65261.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_038_000M1_scaffold_337_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30162..30683)
DNA (522bp) protein (174aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ57_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04400.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30828..31739)
DNA (912bp) protein (304aa)
pyrD; dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Dihydroorotate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T687_9FIRM
L2_038_000M1_scaffold_337_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31732..32505)
DNA (774bp) protein (258aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SVK1_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32524..33006)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U337_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04403.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_337_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33028..33963)
DNA (936bp) protein (312aa)
pyrF; orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBM3_9FIRM
L2_038_000M1_scaffold_337_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33992..35260)
DNA (1269bp) protein (423aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000313|EMBL:CCO04405.1}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000313|EMBL:CCO04405.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Dihydroorotase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ52_9FIRM
L2_038_000M1_scaffold_337_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35348..35827)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T683_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65254.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
Displaying items 1-30 of 76 in total

View Taxonomy