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L2_038_000M1_scaffold_339

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_339_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1000
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000363C92D
Uncharacterized protein {ECO:0000313|EMBL:CDD25605.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_038_000M1_scaffold_339_2
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1441..3882)
DNA (2442bp) protein (814aa)
hypothetical protein, partial n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037FCAC5
RHS repeat-associated core domain {ECO:0000313|EMBL:CCZ07863.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
RHS repeat-associated core domain
L2_038_000M1_scaffold_339_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4030..4821)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B321A4
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
L2_038_000M1_scaffold_339_4
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4938..6725)
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DA2E96
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:CCZ81260.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
RHS repeat-associated core domain-containing protein
L2_038_000M1_scaffold_339_5
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6731..7576)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E0DEA2
RHS repeat {ECO:0000313|EMBL:GAF05555.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
L2_038_000M1_scaffold_339_6
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7594..9717)
DNA (2124bp) protein (708aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E0DEA2
RHS repeat {ECO:0000313|EMBL:GAF05555.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
YD repeat-containing protein
L2_038_000M1_scaffold_339_7
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11407..15771)
DNA (4365bp) protein (1455aa)
RHS repeat-associated core domain n=1 Tax=Odoribacter sp. CAG:788 RepID=R5NVJ7_9PORP
RHS repeat-associated core domain {ECO:0000313|EMBL:CCZ07863.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
cell well associated RhsD protein
L2_038_000M1_scaffold_339_8
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15783..18824)
DNA (3042bp) protein (1014aa)
YD repeat (Two copies) n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DDS5_9PORP
YD repeat (Two copies) {ECO:0000313|EMBL:EHP50722.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
YD repeat-containing protein
L2_038_000M1_scaffold_339_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18853..18963)
DNA (111bp) protein (37aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003118DCA
Uncharacterized protein {ECO:0000313|EMBL:EHB93497.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L2_038_000M1_scaffold_339_10
unknown

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19826..20479
DNA (654bp) protein (218aa)

This feature has no annotations

L2_038_000M1_scaffold_339_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20621..21040
DNA (420bp) protein (140aa)
general secretion pathway protein G n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000375FEB8
Uncharacterized protein {ECO:0000313|EMBL:EHB93508.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
type II general secretion pathway (GSP) G protein
L2_038_000M1_scaffold_339_12
unknown

Not on your lists

21199..21513
DNA (315bp) protein (105aa)

This feature has no annotations

L2_038_000M1_scaffold_339_13
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21504..22922
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F36647
Uncharacterized protein {ECO:0000313|EMBL:EHP50712.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
type II secretion system protein E
L2_038_000M1_scaffold_339_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22926..23861
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003603EAA
Uncharacterized protein {ECO:0000313|EMBL:EHB93505.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
type II and III secretion system protein
L2_038_000M1_scaffold_339_15
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24018..24791
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003603EAA
Type II and III secretion system protein {ECO:0000313|EMBL:KIO47106.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
type II and III secretion system protein
L2_038_000M1_scaffold_339_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24788..25738
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031BA940
Uncharacterized protein {ECO:0000313|EMBL:EHB93504.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L2_038_000M1_scaffold_339_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25735..26229
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EB5F85
Uncharacterized protein {ECO:0000313|EMBL:EHB93503.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L2_038_000M1_scaffold_339_18
unknown

Not on your lists

26234..26626
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F18D31
L2_038_000M1_scaffold_339_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26626..27090
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F8E16A
Uncharacterized protein {ECO:0000313|EMBL:EHB93501.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L2_038_000M1_scaffold_339_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27087..28295
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D4CC1F
Uncharacterized protein {ECO:0000313|EMBL:EHB93500.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L2_038_000M1_scaffold_339_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28283..28630
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000316C842
Uncharacterized protein {ECO:0000313|EMBL:EHB93499.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L2_038_000M1_scaffold_339_22
unknown

Not on your lists

28618..29103
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036557E7
L2_038_000M1_scaffold_339_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29087..30136
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003118DCA
Uncharacterized protein {ECO:0000313|EMBL:EHB93497.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Type II secretion system F domain
L2_038_000M1_scaffold_339_24
unknown

Not on your lists

comp(30753..30845)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_038_000M1_scaffold_339_25
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31433..32122
DNA (690bp) protein (230aa)
Uncharacterized protein id=4505462 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides oleiciplenus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Domain of unknown function (DUF303).
Tax=GWF2_Bacteroidetes_40_14_curated
L2_038_000M1_scaffold_339_26
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32364..32924
DNA (561bp) protein (187aa)
RteC protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YK11_ALIFI
RteC protein
RteC protein {ECO:0000313|EMBL:AFL77329.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_038_000M1_scaffold_339_27
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33433..33885)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I964_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS13405.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
peptidase S24
L2_038_000M1_scaffold_339_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33882..34835)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5VZ16_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63057.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_038_000M1_scaffold_339_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34956..36653)
DNA (1698bp) protein (566aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Alistipes sp. CAG:53 RepID=R5W6F4_9BACT
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCZ95694.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
ABC-type multidrug transport system, ATPase and permease components
L2_038_000M1_scaffold_339_30
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36650..39796)
DNA (3147bp) protein (1049aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
UvrD/REP helicase n=1 Tax=Alistipes sp. CAG:53 RepID=R5VXR5_9BACT
ATP-dependent exonuclase V subunit beta
Displaying items 1-30 of 80 in total

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