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L2_038_000M1_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_376_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105..1178
DNA (1074bp) protein (358aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M453_BIFBI
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EKF16791.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_038_000M1_scaffold_376_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1199..2224)
DNA (1026bp) protein (342aa)
Myo-inositol 2-dehydrogenase n=2 Tax=Bifidobacterium bifidum RepID=E3EQA4_BIFBS
iolG; myo-inositol 2-dehydrogenase
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:EKE50907.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_038_000M1_scaffold_376_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2291..3178)
DNA (888bp) protein (296aa)
Glucose uptake protein n=6 Tax=Bifidobacterium bifidum RepID=E4NYB6_BIFBP
putative sugar uptake protein
Putative glucose uptake protein {ECO:0000313|EMBL:BAQ98600.1}; Putative glucose uptake protein GlcU {ECO:0000313|EMBL:ERI83343.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_376_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3428..4522)
DNA (1095bp) protein (365aa)
AraC family transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQ50_BIFBI
AraC family transcriptional regulator {ECO:0000313|EMBL:EKE50905.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
AraC family transcriptional regulator
L2_038_000M1_scaffold_376_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4837..5049
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=8 Tax=Bifidobacterium RepID=E3EPE0_BIFBS
rpmE2; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_038_000M1_scaffold_376_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5195..6283
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=8 Tax=Bifidobacterium RepID=E3EPD9_BIFBS
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_376_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6548..7537
DNA (990bp) protein (330aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EKE50902.1}; EC=2.1.1.- {ECO:0000313|EMBL:EKE50902.1};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HWQ3_BIFBI
hemK; peptide release factor-glutamine N5-methyltransferase
L2_038_000M1_scaffold_376_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7480..7884)
DNA (405bp) protein (135aa)
Maltose O-acetyl transferase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJA5_BIFBI
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ADO53554.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_376_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8174..8833
DNA (660bp) protein (220aa)
Sua5/YciO/YrdC/YwlC family protein n=8 Tax=Bifidobacterium RepID=E4NYB0_BIFBP
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EKE50900.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_038_000M1_scaffold_376_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8830..10011
DNA (1182bp) protein (394aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase n=2 Tax=Bifidobacterium bifidum RepID=E3EPD5_BIFBS
rfe; putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase
Putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:AFL04966.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_038_000M1_scaffold_376_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10105..11625
DNA (1521bp) protein (507aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJA2_BIFBI
L2_038_000M1_scaffold_376_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11779..13569)
DNA (1791bp) protein (597aa)
agl2; alpha-glucosidase (EC:3.2.1.10)
Alpha-glucosidase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HU21_BIFBI
Alpha-glucosidase {ECO:0000313|EMBL:EKE50022.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_038_000M1_scaffold_376_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13785..14339
DNA (555bp) protein (185aa)
Sensor histidine kinase/phosphatase of two-component system n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMS4_BIFBI
Two-component response regulator {ECO:0000313|EMBL:KFI43718.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
sensor histidine kinase/phosphatase of two-component system
L2_038_000M1_scaffold_376_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14409..15059
DNA (651bp) protein (217aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Oligoribonuclease n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJ99_BIFBI
orn; oligoribonuclease
L2_038_000M1_scaffold_376_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15116..15967
DNA (852bp) protein (284aa)
Cof-like hydrolase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VC41_BIFBI
Cof-like hydrolase {ECO:0000313|EMBL:EFR51156.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_038_000M1_scaffold_376_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16039..17451
DNA (1413bp) protein (471aa)
ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJ97_BIFBI
recD; ATP-dependent exoDNAse subunit alpha
ATP-dependent exoDNAse (Exonuclease V) alpha subunit {ECO:0000313|EMBL:AFL04960.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_038_000M1_scaffold_376_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17561..18430)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GH26_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB24763.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_038_000M1_scaffold_376_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18459..20249
DNA (1791bp) protein (597aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Proline--tRNA ligase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJ94_BIFBI
L2_038_000M1_scaffold_376_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20406..21413)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WJ93_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83361.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_038_000M1_scaffold_376_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21598..22263
DNA (666bp) protein (222aa)
Single-strand DNA binding protein n=6 Tax=Bifidobacterium RepID=E4NYA0_BIFBP
ssb; single-stranded DNA-binding protein
Single-strand DNA binding protein {ECO:0000313|EMBL:CDB24760.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_038_000M1_scaffold_376_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22312..24393)
DNA (2082bp) protein (694aa)
Peptidase family M13 {ECO:0000313|EMBL:EFR51161.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFR51161.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Peptidase family M13 n=2 Tax=Bifidobacterium bifidum RepID=E4VC46_BIFBI
pepO; neutral endopeptidase
L2_038_000M1_scaffold_376_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24622..25527
DNA (906bp) protein (302aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=K2M2L3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15335.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_038_000M1_scaffold_376_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25552..26328
DNA (777bp) protein (259aa)
map; map methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Methionine aminopeptidase n=8 Tax=Bifidobacterium RepID=E3EPC2_BIFBS
L2_038_000M1_scaffold_376_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26539..27831
DNA (1293bp) protein (431aa)
Citrate synthase n=5 Tax=Bifidobacterium RepID=E3EPC1_BIFBS
gltA; citrate synthase I
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_376_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27929..28471)
DNA (543bp) protein (181aa)
polC; DNA polymerase III polC-type (EC:2.7.7.7)
DnaQ DNA polymerase III alpha subunit n=7 Tax=Bifidobacterium RepID=E4NY95_BIFBP
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:ERI83369.1}; Putative exonuclease {ECO:0000313|EMBL:BAQ98577.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_038_000M1_scaffold_376_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28808..29815)
DNA (1008bp) protein (336aa)
oxidoreductase (EC:1.1.1.65)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VC51_BIFBI
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFR51167.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_038_000M1_scaffold_376_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29958..30287
DNA (330bp) protein (110aa)
MerR-type transcriptional regulator n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJ85_BIFBI
MerR family transcriptional regulator
MerR-type transcriptional regulator {ECO:0000313|EMBL:AFL04948.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_038_000M1_scaffold_376_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30327..32741)
DNA (2415bp) protein (805aa)
ctpE; cation-transporting ATPase CtpE (EC:3.6.3.6)
CtpE Cation-transporting ATPase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY91_BIFBP
Cation transporter, E1-E2 family ATPase {ECO:0000313|EMBL:ADO53533.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_376_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32886..35804
DNA (2919bp) protein (973aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY90_BIFBP
Putative ABC-transporter protein {ECO:0000313|EMBL:ADO53532.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_038_000M1_scaffold_376_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35821..37065
DNA (1245bp) protein (415aa)
glxK; glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=2 Tax=Bifidobacterium bifidum RepID=K2HRF5_BIFBI
Glycerate kinase {ECO:0000313|EMBL:EKE50003.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Displaying items 1-30 of 45 in total

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