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L2_038_000M1_scaffold_389

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_389_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

214..813
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYW1_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04712.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

810..1256
DNA (447bp) protein (149aa)
UPF0178 protein BN714_01362 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SVA2_9FIRM
conserved hypothetical protein
UPF0178 protein BN714_01362 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1337..3607
DNA (2271bp) protein (757aa)
bglB; beta-D-glucoside glucohydrolase (Glycoside Hydrolase Family 3 protein ) (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2U6_9FIRM
Beta-glucosidase {ECO:0000313|EMBL:CDC65147.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3614..4480
DNA (867bp) protein (289aa)
Helix-hairpin-helix motif protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYV7_9FIRM
Helix-hairpin-helix motif protein {ECO:0000313|EMBL:CDC65145.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_389_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4586..5305)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65143.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_389_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5302..5817)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBB3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04707.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5969..6481)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65140.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_389_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6500..7039)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65138.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_389_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7377..7673
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBB1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04703.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7682..8047
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65135.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_038_000M1_scaffold_389_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8047..8652
DNA (606bp) protein (202aa)
Flavin reductase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W9_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04701.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8657..9805
DNA (1149bp) protein (383aa)
Zinc dependent phospholipase C n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV90_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04700.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9849..10631)
DNA (783bp) protein (261aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2T5_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO04699.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10625..11323)
DNA (699bp) protein (233aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC65131.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11384..11644)
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYU3_9FIRM
spoVS; Stage V sporulation protein S
Stage V sporulation protein S {ECO:0000313|EMBL:CDC65130.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11752..12519)
DNA (768bp) protein (256aa)
Putative metallophosphoesterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W5_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04696.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12638..14578)
DNA (1941bp) protein (647aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ftsH; Cell division protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV85_9FIRM
L2_038_000M1_scaffold_389_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14617..15141)
DNA (525bp) protein (175aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2T1_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDC65127.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15241..16566)
DNA (1326bp) protein (442aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA3_9FIRM
L2_038_000M1_scaffold_389_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16559..17920)
DNA (1362bp) protein (454aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYT8_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CDC65125.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17923..18369)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W1_9FIRM
rplI; ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18394..20370)
DNA (1977bp) protein (659aa)
Phosphoesterase RecJ domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV80_9FIRM
conserved hypothetical protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CDC65123.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20418..22322)
DNA (1905bp) protein (635aa)
Ribonuclease J (EC:3.1.-.-)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA0_9FIRM
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:CDC65121.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22665..24815)
DNA (2151bp) protein (717aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65119.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_389_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24975..27335
DNA (2361bp) protein (787aa)
pcrA; DNA helicase II / ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2S3_9FIRM
L2_038_000M1_scaffold_389_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27429..27641)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TB95_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04686.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27698..28780)
DNA (1083bp) protein (361aa)
Nucleoside recognition domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5V2_9FIRM
Nucleoside recognition domain protein {ECO:0000313|EMBL:CDC65114.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ylbJ; Sporulation integral membrane protein YlbJ
L2_038_000M1_scaffold_389_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28872..29153
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2R8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04684.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_389_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29153..30340
DNA (1188bp) protein (396aa)
Putative sporulation protein YqfD n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYS4_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:CDC65110.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
yqfD; sporulation protein YqfD
L2_038_000M1_scaffold_389_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30393..31430
DNA (1038bp) protein (346aa)
PhoH-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2R5_9FIRM
phoH; PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:CCO04682.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 65 in total

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