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L2_038_000M1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_391_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(315..785)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32027.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_038_000M1_scaffold_391_2
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1147..1788)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J2TGZ6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KEO82861.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
L2_038_000M1_scaffold_391_3
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1793..2992)
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO82862.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
Type I Restriction Enzyme id=3224671 bin=GWF2_OP3_38_59 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
type I restriction/modification system, M subunit
L2_038_000M1_scaffold_391_4
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3131..3370
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Acinetobacter nosocomialis NIPH 2119 RepID=N8R793_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KEO82863.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
DNA-binding protein
L2_038_000M1_scaffold_391_5
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3378..4202
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J7C3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO82864.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
L2_038_000M1_scaffold_391_6
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4633..5217)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N4K0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77973.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L2_038_000M1_scaffold_391_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5198..5314)
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LXI4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22337.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_038_000M1_scaffold_391_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6514..7872)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78021.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7885..8370)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78022.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8367..8576)
DNA (210bp) protein (70aa)
Transcriptional regulator XRE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIF6_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCZ78023.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
XRE family transcriptional regulator
L2_038_000M1_scaffold_391_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8764..9873
DNA (1110bp) protein (370aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
3-dehydroquinate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK4_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:CCZ78024.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_391_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9866..11059
DNA (1194bp) protein (398aa)
Uncharacterized membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ58_9FIRM
Uncharacterized membrane protein {ECO:0000313|EMBL:CCZ78025.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized membrane protein
L2_038_000M1_scaffold_391_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11151..11963
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78026.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_391_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12016..12489)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF8_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ78027.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12486..13355)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78028.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13377..14681)
DNA (1305bp) protein (435aa)
Uncharacterized conserved protein related to MYG1 family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK8_9FIRM
Uncharacterized conserved protein related to MYG1 family {ECO:0000313|EMBL:CCZ78029.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized conserved protein related to MYG1 family
L2_038_000M1_scaffold_391_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14691..14840)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78030.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_391_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15529..16485)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79463.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16620..17729)
DNA (1110bp) protein (370aa)
Transcriptional regulator GntR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFG7_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ79462.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
araR; AraR
L2_038_000M1_scaffold_391_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17757..18728)
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7P3_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79461.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter
L2_038_000M1_scaffold_391_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18739..20238)
DNA (1500bp) protein (500aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMZ8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ79460.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family
L2_038_000M1_scaffold_391_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20258..21208)
DNA (951bp) protein (317aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUR6_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79459.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
inner-membrane translocator
L2_038_000M1_scaffold_391_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21300..22469)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79458.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LacI family transcriptional regulator
L2_038_000M1_scaffold_391_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22895..23131
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79457.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23245..24825)
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7N6_9FIRM
L2_038_000M1_scaffold_391_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25005..26093
DNA (1089bp) protein (363aa)
Signaling protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMY9_9FIRM
Signaling protein {ECO:0000313|EMBL:CCZ79455.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
signaling protein
L2_038_000M1_scaffold_391_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26096..27157)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79454.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_391_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27298..27858)
DNA (561bp) protein (187aa)
Putative flavoredoxin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UME5_9FIRM
Putative flavoredoxin {ECO:0000313|EMBL:CCZ79453.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flavoredoxin
L2_038_000M1_scaffold_391_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28418..29629)
DNA (1212bp) protein (404aa)
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFF5_9FIRM
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components {ECO:0000313|EMBL:CCZ79452.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferric enterobactin transport ATP-binding protein fepC
L2_038_000M1_scaffold_391_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29722..30774)
DNA (1053bp) protein (351aa)
ABC-type Fe3+-siderophore transport system permease component n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7M9_9FIRM
ABC-type Fe3+-siderophore transport system permease component {ECO:0000313|EMBL:CCZ79451.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type Fe3+-siderophore transport system, permease component
Displaying items 1-30 of 63 in total

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