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L2_038_000M1_scaffold_425

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_425_1
unknown

Not on your lists

3..188
DNA (186bp) protein (62aa)

This feature has no annotations

L2_038_000M1_scaffold_425_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(185..2629)
DNA (2445bp) protein (815aa)
Cellobiose phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULI9_9FIRM
Cellobiose phosphorylase {ECO:0000313|EMBL:CCZ79173.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosyl transferase family protein
L2_038_000M1_scaffold_425_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3110..4132
DNA (1023bp) protein (341aa)
Transcriptional regulator (LacI family) protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTY9_9FIRM
Transcriptional regulator (LacI family) protein {ECO:0000313|EMBL:CCZ79174.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator (LacI family) protein
L2_038_000M1_scaffold_425_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4194..5603
DNA (1410bp) protein (470aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM89_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ79175.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_038_000M1_scaffold_425_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5733..6650
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79176.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_038_000M1_scaffold_425_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6656..7522
DNA (867bp) protein (289aa)
Sugar ABC transporter permease n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEL6_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:CCZ79177.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_038_000M1_scaffold_425_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7635..9482)
DNA (1848bp) protein (616aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULJ3_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CCZ79178.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_425_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9615..10151
DNA (537bp) protein (179aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTZ4_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:CCZ79179.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bi-functional aminoacyl-tRNA synthetase
L2_038_000M1_scaffold_425_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10138..10617)
DNA (480bp) protein (160aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cytosine/adenosine deaminases n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM93_9FIRM
Cytosine/adenosine deaminases
L2_038_000M1_scaffold_425_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10718..11266
DNA (549bp) protein (183aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Acetyltransferases including N-acetylases of ribosomal proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6U2_9FIRM
Acetyltransferases including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CCZ79181.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_425_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11253..12185)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79182.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_425_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12360..12749
DNA (390bp) protein (130aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULJ9_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCZ79183.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Fe2+/Zn2+ uptake regulation proteins
L2_038_000M1_scaffold_425_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12779..13321
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79184.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferredoxin hydrogenase
L2_038_000M1_scaffold_425_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13522..14253
DNA (732bp) protein (244aa)
Bacterial group 2 Ig-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM97_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCZ79185.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_425_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14443..16476
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79186.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_425_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16585..17199
DNA (615bp) protein (205aa)
Glycoside hydrolase clan GH-D n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM4_9FIRM
Glycoside hydrolase clan GH-D {ECO:0000313|EMBL:CCZ79187.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycoside hydrolase clan GH-D
L2_038_000M1_scaffold_425_17
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

17265..17654
DNA (390bp) protein (130aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZEJ6_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDD46808.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L2_038_000M1_scaffold_425_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17868..18827
DNA (960bp) protein (320aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU05_9FIRM
Glucokinase {ECO:0000313|EMBL:CCZ79189.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_425_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18844..19248
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79190.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_425_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19931..20203
DNA (273bp) protein (91aa)
Anti-sigma-28 factor FlgM n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6V2_9FIRM
Anti-sigma-28 factor FlgM {ECO:0000313|EMBL:CCZ79191.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Anti-sigma-28 factor, FlgM.
L2_038_000M1_scaffold_425_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20234..20746
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79192.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_425_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20761..22470
DNA (1710bp) protein (570aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULK8_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ79193.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein FlgK
L2_038_000M1_scaffold_425_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22489..24360
DNA (1872bp) protein (624aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU10_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ79194.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein FlgK
L2_038_000M1_scaffold_425_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24416..26002
DNA (1587bp) protein (529aa)
Flagellar hook-associated protein 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA4_9FIRM
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:CCZ79195.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein 3
L2_038_000M1_scaffold_425_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26029..26493
DNA (465bp) protein (155aa)
Flagellar assembly factor FliW n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6V7_9FIRM
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar assembly factor fliW
L2_038_000M1_scaffold_425_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26497..26715
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEN2_9FIRM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbon storage regulator (csrA)
L2_038_000M1_scaffold_425_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26848..27261
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79198.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized flagellar protein FlaG
L2_038_000M1_scaffold_425_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27280..28833
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79199.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fliD1; flagellar hook-associated protein FliD1
L2_038_000M1_scaffold_425_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28898..29305
DNA (408bp) protein (136aa)
Flagellar protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA7_9FIRM
Flagellar protein {ECO:0000313|EMBL:CCZ79200.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar protein
L2_038_000M1_scaffold_425_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29323..29763
DNA (441bp) protein (147aa)
FlgN protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6W0_9FIRM
FlgN protein {ECO:0000313|EMBL:CCZ79201.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
FlgN protein.
Displaying items 1-30 of 52 in total

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