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L2_038_000M1_scaffold_454

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_454_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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343..2343
DNA (2001bp) protein (667aa)
NADH:flavin oxidoreductase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHT9_EUBR3
NADH:flavin oxidoreductase {ECO:0000313|EMBL:ACR76576.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
NADH:flavin oxidoreductase
L2_038_000M1_scaffold_454_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2515..3384)
DNA (870bp) protein (290aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Shikimate dehydrogenase n=3 Tax=Eubacterium rectale RepID=C4ZHU1_EUBR3
L2_038_000M1_scaffold_454_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3474..3938)
DNA (465bp) protein (155aa)
MutT/NUDIX family protein n=3 Tax=Eubacterium rectale RepID=C4ZHU5_EUBR3
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CBK93039.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_038_000M1_scaffold_454_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3952..5538)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF46009.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L2_038_000M1_scaffold_454_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5646..6716)
DNA (1071bp) protein (357aa)
Chaperone DnaJ domain protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHU6_EUBR3
chaperone DnaJ domain protein
Chaperone DnaJ domain protein {ECO:0000313|EMBL:ACR76583.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_6
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6838..7311)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TS64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72644.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_038_000M1_scaffold_454_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7625..8212)
DNA (588bp) protein (196aa)
Cytidylate kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHY3_EUBR3
cytidylate kinase
Cytidylate kinase {ECO:0000313|EMBL:ACR76620.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8269..8961)
DNA (693bp) protein (231aa)
LrgB-like family protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TKX1_9FIRM
LrgB-like family protein {ECO:0000313|EMBL:CDC74018.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
LrgB-like family protein
L2_038_000M1_scaffold_454_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8979..9356)
DNA (378bp) protein (126aa)
Putative effector of murein hydrolase LrgA n=3 Tax=Eubacterium rectale RepID=C4ZHY5_EUBR3
Putative effector of murein hydrolase LrgA
Putative effector of murein hydrolase LrgA {ECO:0000313|EMBL:ACR76622.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9408..10199)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6UTK7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76623.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10439..10852)
DNA (414bp) protein (138aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=4 Tax=Eubacterium RepID=C4ZHY8_EUBR3
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_038_000M1_scaffold_454_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10876..12267)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATP synthase subunit beta n=2 Tax=Eubacterium RepID=C4ZHY9_EUBR3
F0F1 ATP synthase subunit beta
L2_038_000M1_scaffold_454_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12276..13166)
DNA (891bp) protein (297aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=3 Tax=Eubacterium rectale RepID=C4ZHZ0_EUBR3
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13178..14677)
DNA (1500bp) protein (500aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATP synthase subunit alpha n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U1R7_9FIRM
ATP synthase F1, alpha subunit
L2_038_000M1_scaffold_454_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14683..15201)
DNA (519bp) protein (173aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Eubacterium rectale RepID=C4ZHZ2_EUBR3
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15179..15631)
DNA (453bp) protein (151aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=4 Tax=Eubacterium RepID=C4ZHZ3_EUBR3
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_17
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15687..15917)
DNA (231bp) protein (77aa)
ATP synthase F0 subcomplex C subunit n=5 Tax=Clostridiales RepID=D4JHH7_9FIRM
hypothetical protein
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L2_038_000M1_scaffold_454_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16055..16741)
DNA (687bp) protein (229aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=4 Tax=Eubacterium RepID=C4ZHZ5_EUBR3
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_038_000M1_scaffold_454_19
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17212..17991)
DNA (780bp) protein (260aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U1T3_9FIRM
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CDC74056.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Predicted divalent heavy-metal cations transporter
L2_038_000M1_scaffold_454_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18388..19644)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TKZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90053.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_038_000M1_scaffold_454_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19763..21016)
DNA (1254bp) protein (418aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPG8_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CDC74060.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_038_000M1_scaffold_454_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21053..21436)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI00_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76637.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22252..23535
DNA (1284bp) protein (428aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Dihydroorotase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TW91_9FIRM
pyrC; dihydroorotase
L2_038_000M1_scaffold_454_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23597..23749)
DNA (153bp) protein (51aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHI8_9FIRM
sensory transduction protein kinase
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK93085.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_038_000M1_scaffold_454_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23815..25296)
DNA (1482bp) protein (494aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBK93086.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK93086.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Eubacterium RepID=D4JHI9_9FIRM
L2_038_000M1_scaffold_454_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25409..26353)
DNA (945bp) protein (315aa)
HD-superfamily hydrolase n=3 Tax=Eubacterium RepID=C4ZI05_EUBR3
uncharacterized domain HDIG
HD-superfamily hydrolase {ECO:0000313|EMBL:CDC74071.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_038_000M1_scaffold_454_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26371..27639)
DNA (1269bp) protein (423aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=2 Tax=Eubacterium RepID=D6E3Q1_9FIRM
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK90041.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_038_000M1_scaffold_454_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27943..30321
DNA (2379bp) protein (793aa)
Endonuclease MutS2 {ECO:0000255|HAMAP-Rule:MF_00092}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00092};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Endonuclease MutS2 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=MUTS2_EUBR3
DNA mismatch repair protein
L2_038_000M1_scaffold_454_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30373..31074
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=4 Tax=Eubacterium RepID=D4JHJ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76645.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_038_000M1_scaffold_454_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31077..32516
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Signal transduction histidine kinase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3P8_9FIRM
Signal transduction histidine kinase
Displaying items 1-30 of 49 in total

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