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L2_038_000M1_scaffold_491

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_491_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

L2_038_000M1_scaffold_491_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(269..565)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78483.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Global regulator protein family.
L2_038_000M1_scaffold_491_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

883..1311
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HWP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29182.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
XRE family transcriptional regulator
L2_038_000M1_scaffold_491_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1403..1594)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78485.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_491_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1692..2414)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4W7_9FIRM
L2_038_000M1_scaffold_491_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2542..3597)
DNA (1056bp) protein (352aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCJ0_9FIRM
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ78487.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative methyl-accepting chemotaxis protein
L2_038_000M1_scaffold_491_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3769..4293)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78488.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
spore maturation protein B
L2_038_000M1_scaffold_491_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4290..4874)
DNA (585bp) protein (195aa)
Uncharacterized membrane protein required for spore maturation in B.subtilis n=1 Tax=Roseburia sp. CAG:18 RepID=R5URX8_9FIRM
Uncharacterized membrane protein required for spore maturation in B.subtilis {ECO:0000313|EMBL:CCZ78489.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
L2_038_000M1_scaffold_491_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5025..6770
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78490.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_491_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6787..7641)
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4X2_9FIRM
conserved hypothetical protein TIGR00096
L2_038_000M1_scaffold_491_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7889..9241
DNA (1353bp) protein (451aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCJ7_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ78492.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L2_038_000M1_scaffold_491_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9391..9753)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78493.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_491_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9999..12626)
DNA (2628bp) protein (876aa)
Excinuclease ATPase subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5URY5_9FIRM
Excinuclease ATPase subunit {ECO:0000313|EMBL:CCZ78494.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Excinuclease ATPase subunit
L2_038_000M1_scaffold_491_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12688..14307)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKF7_9FIRM
L2_038_000M1_scaffold_491_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14366..14623)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78496.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphotransferase System HPr (HPr) Family
L2_038_000M1_scaffold_491_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14689..16722)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78497.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L2_038_000M1_scaffold_491_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16735..17649)
DNA (915bp) protein (305aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJS5_9FIRM
L2_038_000M1_scaffold_491_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17646..18395)
DNA (750bp) protein (250aa)
Transcriptional regulators of sugar metabolism n=1 Tax=Roseburia sp. CAG:18 RepID=R5US09_9FIRM
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CCZ78499.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators of sugar metabolism
L2_038_000M1_scaffold_491_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19052..20575
DNA (1524bp) protein (508aa)
Fe-hydrogenase large subunit family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKI8_9FIRM
Fe-hydrogenase large subunit family protein {ECO:0000313|EMBL:CCZ78500.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Fe-hydrogenase large subunit family protein
L2_038_000M1_scaffold_491_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20645..21403)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V509_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78501.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_491_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21527..23542)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78502.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L2_038_000M1_scaffold_491_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23547..24068)
DNA (522bp) protein (174aa)
Sigma-24 ECF subfamily n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJS9_9FIRM
Sigma-24 ECF subfamily {ECO:0000313|EMBL:CCZ78503.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA polymerase sigma factor, sigma-70 family
L2_038_000M1_scaffold_491_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24170..24985)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79721.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_491_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24987..26960)
DNA (1974bp) protein (658aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNT3_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCZ79720.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
diguanylate cyclase (GGDEF) domain
L2_038_000M1_scaffold_491_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26981..27967)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79719.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_491_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28085..28879)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79718.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_491_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28876..29430)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG36_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ79717.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA polymerase sigma factor, sigma-70 family
L2_038_000M1_scaffold_491_28
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29614..29910)
DNA (297bp) protein (99aa)
Helix-turn-helix n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P1W5_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CCZ03646.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Helix-turn-helix.
L2_038_000M1_scaffold_491_29
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29925..30263)
DNA (339bp) protein (113aa)
Phage derived protein Gp49-like (DUF891) n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NHK3_9FIRM
Phage derived protein Gp49-like (DUF891) {ECO:0000313|EMBL:CCZ03645.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Phage derived protein Gp49-like (DUF891).
L2_038_000M1_scaffold_491_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30398..30778)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79716.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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