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L2_038_000M1_scaffold_526

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_526_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(285..1406)
DNA (1122bp) protein (374aa)
ApbE family protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMZ7_9FIRM
ApbE family protein {ECO:0000313|EMBL:EFV15749.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L2_038_000M1_scaffold_526_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1381..2679)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY23050.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L2_038_000M1_scaffold_526_3
unknown

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comp(2702..3100)
DNA (399bp) protein (133aa)

This feature has no annotations

L2_038_000M1_scaffold_526_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3216..4478)
DNA (1263bp) protein (421aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=3 Tax=Lachnospiraceae RepID=L1Q4X2_9FIRM
L2_038_000M1_scaffold_526_5
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4502..4948)
DNA (447bp) protein (149aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P2I7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA32771.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_038_000M1_scaffold_526_6
unknown

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comp(5021..7159)
DNA (2139bp) protein (713aa)
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Polyphosphate kinase n=2 Tax=Clostridiales RepID=D4MW53_9FIRM
L2_038_000M1_scaffold_526_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7241..8629)
DNA (1389bp) protein (463aa)
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Glycine--tRNA ligase n=3 Tax=Clostridiales RepID=D4MW52_9FIRM
L2_038_000M1_scaffold_526_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8796..9158
DNA (363bp) protein (121aa)
Predicted transcriptional regulators n=5 Tax=Clostridiales RepID=D4MW51_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY23045.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted transcriptional regulators
L2_038_000M1_scaffold_526_9
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9235..9957)
DNA (723bp) protein (241aa)
DNA repair protein RecO n=5 Tax=Clostridiales RepID=D4MW50_9FIRM
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_038_000M1_scaffold_526_10
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9960..10865)
DNA (906bp) protein (302aa)
GTPase Era n=3 Tax=Clostridiales RepID=D4MW49_9FIRM
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_038_000M1_scaffold_526_11
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10889..13789)
DNA (2901bp) protein (967aa)
Predicted Zn-dependent peptidases insulinase-like n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z189_9FIRM
Predicted Zn-dependent peptidases insulinase-like {ECO:0000313|EMBL:CDA32765.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_038_000M1_scaffold_526_12
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13942..14988)
DNA (1047bp) protein (349aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=3 Tax=Clostridiales RepID=D4MW47_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CDA32764.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_038_000M1_scaffold_526_13
unknown

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comp(15092..15868)
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=D4MW46_9FIRM
RNA polymerase, sigma 29 subunit, SigE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_14
unknown

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comp(15814..16614)
DNA (801bp) protein (267aa)
Sporulation factor SpoIIGA n=3 Tax=Clostridiales RepID=D4MW45_9FIRM
Sporulation factor SpoIIGA.
Sporulation factor SpoIIGA {ECO:0000313|EMBL:CBL39611.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_15
unknown

Not on your lists

16777..17262
DNA (486bp) protein (162aa)
G:T/U mismatch-specific DNA glycosylase n=2 Tax=Clostridiales RepID=D4MW43_9FIRM
G:T/U mismatch-specific DNA glycosylase
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CBL39609.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_16
unknown

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comp(17244..17918)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2H6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39608.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17915..18865)
DNA (951bp) protein (317aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=4 Tax=Clostridiales RepID=D4MW41_9FIRM
L2_038_000M1_scaffold_526_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19225..19587)
DNA (363bp) protein (121aa)
Helix-turn-helix n=4 Tax=Clostridiales RepID=D4MW40_9FIRM
Helix-turn-helix.
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY23035.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_038_000M1_scaffold_526_19
unknown

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comp(20021..21304)
DNA (1284bp) protein (428aa)
Cytosine deaminase and related metal-dependent hydrolases n=3 Tax=Clostridiales RepID=D4MW38_9FIRM
Cytosine deaminase and related metal-dependent hydrolases
Cytosine deaminase and related metal-dependent hydrolases {ECO:0000313|EMBL:CBL39604.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_20
unknown

Not on your lists

comp(21316..22155)
DNA (840bp) protein (280aa)
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CBL39603.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Purine nucleoside phosphorylase n=2 Tax=Clostridiales RepID=D4MW37_9FIRM
L2_038_000M1_scaffold_526_21
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22338..23054
DNA (717bp) protein (239aa)
Response regulator receiver domain-containing protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z7R5_9FIRM
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:CDA32754.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Response regulator of the LytR/AlgR family
L2_038_000M1_scaffold_526_22
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23061..23876
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VN18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15770.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L2_038_000M1_scaffold_526_23
unknown

Not on your lists

23870..24382
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2G8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39601.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_24
unknown

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comp(24392..24748)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=5 Tax=Clostridiales RepID=D4MW34_9FIRM
LSU ribosomal protein L20P
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24778..24975)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=5 Tax=Clostridiales RepID=D4MW33_9FIRM
LSU ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_038_000M1_scaffold_526_26
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25032..25607)
DNA (576bp) protein (192aa)
Translation initiation factor IF-3 n=5 Tax=Clostridiales RepID=D4MW32_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
bacterial translation initiation factor 3 (bIF-3)
L2_038_000M1_scaffold_526_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25774..26709)
DNA (936bp) protein (312aa)
Bacterial Ig-like domain-containing protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z7R0_9FIRM
Bacterial Ig-like domain-containing protein {ECO:0000313|EMBL:CDA32749.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Bacterial Ig-like domain (group 2).
L2_038_000M1_scaffold_526_28
unknown

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comp(26802..28022)
DNA (1221bp) protein (407aa)
Bacterial Ig-like domain (Group 2) n=2 Tax=Clostridiales RepID=D4MW30_9FIRM
Bacterial Ig-like domain (group 2).
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CBL39596.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_29
unknown

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comp(28040..28756)
DNA (717bp) protein (239aa)
Capsular exopolysaccharide family n=2 Tax=Clostridiales RepID=D4MW29_9FIRM
capsular exopolysaccharide family
Capsular exopolysaccharide family {ECO:0000313|EMBL:CBL39595.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_038_000M1_scaffold_526_30
unknown

Not on your lists

comp(28758..29480)
DNA (723bp) protein (241aa)
Capsular polysaccharide biosynthesis protein n=2 Tax=Clostridiales RepID=D4MW28_9FIRM
Capsular polysaccharide biosynthesis protein
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CBL39594.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Displaying items 1-30 of 45 in total

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