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L2_038_000M1_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_645_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1692)
DNA (1692bp) protein (564aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V834_9FIRM
L2_038_000M1_scaffold_645_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1707..2258)
DNA (552bp) protein (184aa)
Transcription elongation factor GreA n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFU8_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
greA; transcription elongation factor GreA
L2_038_000M1_scaffold_645_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2417..3385)
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
tRNA-dihydrouridine synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMT0_9FIRM
tRNA-U20-dihydrouridine synthase
L2_038_000M1_scaffold_645_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3388..4167)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV64_9FIRM
L2_038_000M1_scaffold_645_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4164..4532)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79595.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4519..5496)
DNA (978bp) protein (326aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Roseburia sp. CAG:18 RepID=R5V838_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_645_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5538..6527)
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFV2_9FIRM
L2_038_000M1_scaffold_645_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6658..7920)
DNA (1263bp) protein (421aa)
Putative spore cortex-lytic enzyme n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMT3_9FIRM
Putative spore cortex-lytic enzyme {ECO:0000313|EMBL:CCZ79598.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative spore cortex-lytic enzyme
L2_038_000M1_scaffold_645_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8240..8536)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79599.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_038_000M1_scaffold_645_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8729..9805
DNA (1077bp) protein (359aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNH0_9FIRM
L2_038_000M1_scaffold_645_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9901..10311)
DNA (411bp) protein (137aa)
Cell cycle regulation histidine triad (HIT) protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V842_9FIRM
Cell cycle regulation histidine triad (HIT) protein {ECO:0000313|EMBL:CCZ79601.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L2_038_000M1_scaffold_645_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10323..11312)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79602.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11337..11960)
DNA (624bp) protein (208aa)
Rhomboid family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMT6_9FIRM
Rhomboid family protein {ECO:0000313|EMBL:CCZ79603.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12027..13274)
DNA (1248bp) protein (416aa)
FOG: FHA domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV70_9FIRM
FOG: FHA domain {ECO:0000313|EMBL:CCZ79604.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
FOG: FHA domain
L2_038_000M1_scaffold_645_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13271..13468)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79605.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13480..13920)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V848_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79606.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13925..14836)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79607.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14839..16392)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79608.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16392..16559)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79609.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16572..17789)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79610.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17800..18537)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V852_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79611.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18494..19750)
DNA (1257bp) protein (419aa)
Flp pilus assembly protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFW0_9FIRM
Flp pilus assembly protein {ECO:0000313|EMBL:CCZ79612.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Flp pilus assembly protein
L2_038_000M1_scaffold_645_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19743..20741)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79613.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20758..21291)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79614.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21432..21662
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79615.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF2508).
L2_038_000M1_scaffold_645_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21685..22161)
DNA (477bp) protein (159aa)
Putative flagellar protein FliS n=1 Tax=Roseburia sp. CAG:18 RepID=R5V857_9FIRM
Putative flagellar protein FliS {ECO:0000313|EMBL:CCZ79616.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_038_000M1_scaffold_645_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22171..23625)
DNA (1455bp) protein (485aa)
Flagellin n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFW5_9FIRM
Flagellin {ECO:0000313|EMBL:CCZ79617.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellin
L2_038_000M1_scaffold_645_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23818..24030
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79618.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Domain of unknown function (DUF1858).
L2_038_000M1_scaffold_645_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24088..24837)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UV82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79619.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Negative regulator of genetic competence, sporulation and motility
L2_038_000M1_scaffold_645_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25015..26379
DNA (1365bp) protein (455aa)
Protein kinase domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNJ0_9FIRM
Protein kinase domain {ECO:0000313|EMBL:CCZ79620.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein kinase domain.
Displaying items 1-30 of 48 in total

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