ggKbase home page

L2_038_000M1_scaffold_723

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_723_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(3..1223)
DNA (1221bp) protein (407aa)
Phosphatidylserine/phosphatidylglycerophosphate/c ardiolipin synthases and related enzymes n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMP1_9FIRM
Phosphatidylserine/phosphatidylglycerophosphate/c ardiolipin synthases and related enzymes {ECO:0000313|EMBL:CDA98021.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
cardiolipin synthase
L2_038_000M1_scaffold_723_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1599..2138)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01961.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_038_000M1_scaffold_723_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2315..3394)
DNA (1080bp) protein (360aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. CAG:91 RepID=R6W5F4_9CLOT
L2_038_000M1_scaffold_723_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3400..3837)
DNA (438bp) protein (146aa)
NifU protein n=3 Tax=root RepID=R6EBZ7_9FIRM
NifU protein {ECO:0000313|EMBL:CDD01958.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
NifU protein
L2_038_000M1_scaffold_723_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3864..5042)
DNA (1179bp) protein (393aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Clostridium sp. CAG:91 RepID=R6X668_9CLOT
L2_038_000M1_scaffold_723_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5179..6519
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01956.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
polysaccharide biosynthesis protein
L2_038_000M1_scaffold_723_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6609..7073)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. CAG:91 RepID=R6VXR8_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
transcriptional regulator NrdR
L2_038_000M1_scaffold_723_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7127..7360)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EC02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98033.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_038_000M1_scaffold_723_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

7523..8302
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELS0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
RNA polymerase, sigma subunit, RpsG/SigG
L2_038_000M1_scaffold_723_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8292..8840)
DNA (549bp) protein (183aa)
Putative VanZ protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VTC5_9CLOT
Putative VanZ protein {ECO:0000313|EMBL:CDD01948.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Glycopeptide antibiotics resistance protein
L2_038_000M1_scaffold_723_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8880..9188)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X655_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01947.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_038_000M1_scaffold_723_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9336..10073)
DNA (738bp) protein (246aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCP6_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
RNA polymerase, sigma 29 subunit, SigE
L2_038_000M1_scaffold_723_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10033..10941)
DNA (909bp) protein (303aa)
Putative sigma-E processing peptidase SpoIIGA n=1 Tax=Clostridium sp. CAG:91 RepID=R6VTC0_9CLOT
Putative sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:CDD01943.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
peptidase U4 sporulation factor SpoIIGA
L2_038_000M1_scaffold_723_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10941..11066)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W5D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01939.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_038_000M1_scaffold_723_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(11066..12865)
DNA (1800bp) protein (600aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98039.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_038_000M1_scaffold_723_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12938..15199)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99008.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ftsI; cell division protein FtsI
L2_038_000M1_scaffold_723_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15218..15673)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VX53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99004.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ftsL; cell division protein FtsL
L2_038_000M1_scaffold_723_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15707..16645)
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:91 RepID=R6VPQ1_9CLOT
L2_038_000M1_scaffold_723_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16672..17103)
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:91 RepID=R6WY44_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
MraZ protein
L2_038_000M1_scaffold_723_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17406..18278)
DNA (873bp) protein (291aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W4A3_9CLOT
L2_038_000M1_scaffold_723_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18457..19554)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKG8_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
GTP-binding protein YchF
L2_038_000M1_scaffold_723_22
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19644..20774)
DNA (1131bp) protein (377aa)
Site-specific recombinase phage integrase family n=1 Tax=Clostridium sp. CAG:510 RepID=R6CA87_9CLOT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDA69839.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L2_038_000M1_scaffold_723_23
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20849..21247)
DNA (399bp) protein (133aa)
DNA binding domain excisionase family n=1 Tax=Clostridium sp. CAG:510 RepID=R6C2W3_9CLOT
DNA binding domain excisionase family {ECO:0000313|EMBL:CDA69840.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L2_038_000M1_scaffold_723_24
unknown

Not on your lists

comp(21276..21533)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_038_000M1_scaffold_723_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21686..22138)
DNA (453bp) protein (151aa)
methyltransferase n=1 Tax=Blautia producta RepID=UPI00035CAA50
Uncharacterized protein {ECO:0000313|EMBL:EFD01285.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
putative methyltransferase
L2_038_000M1_scaffold_723_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22348..22563)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JB44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77831.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_038_000M1_scaffold_723_27
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22596..22973)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GWH6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42168.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_038_000M1_scaffold_723_28
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23168..23845)
DNA (678bp) protein (226aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Uncharacterized protein n=2 Tax=Clostridium RepID=R0BG17_9CLOT
DNA methylase
L2_038_000M1_scaffold_723_29
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23861..24553)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DSP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA87919.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
hypothetical protein
L2_038_000M1_scaffold_723_30
unknown

Not on your lists

comp(24750..24965)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

View Taxonomy