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L2_038_000M1_scaffold_771

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_771_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(210..1511)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPH3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36286.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_038_000M1_scaffold_771_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1816..3444)
DNA (1629bp) protein (543aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Putative UTP--hexose-1-phosphate uridylyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Z9_9ACTN
L2_038_000M1_scaffold_771_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3435..4640)
DNA (1206bp) protein (402aa)
galactokinase (EC:2.7.1.6)
GHMP kinase, N-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E900_9ACTN
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EBA39746.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_038_000M1_scaffold_771_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5025..6011
DNA (987bp) protein (329aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Sugar-binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9B0_9ACTN
Sugar-binding domain protein {ECO:0000313|EMBL:CDA36283.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_038_000M1_scaffold_771_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6141..7301
DNA (1161bp) protein (387aa)
Metallo-beta-lactamase domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A576_9ACTN
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDA36282.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
flavoprotein
L2_038_000M1_scaffold_771_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7364..8167)
DNA (804bp) protein (268aa)
Transcriptional regulator, DeoR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E904_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74384.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DeoR family transcriptional regulator
L2_038_000M1_scaffold_771_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8370..9359
DNA (990bp) protein (330aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=2 Tax=Collinsella RepID=A4E905_9ACTN
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EBA39750.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_038_000M1_scaffold_771_8
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9998..10963
DNA (966bp) protein (322aa)
DNA-binding HTH domain-containing protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5V4_9ACTN
DNA-binding HTH domain-containing protein {ECO:0000313|EMBL:CDD85168.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
CsgD; DNA-binding HTH domain-containing protein
L2_038_000M1_scaffold_771_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11293..13494)
DNA (2202bp) protein (734aa)
Efflux ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPG2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74379.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_038_000M1_scaffold_771_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13484..14269)
DNA (786bp) protein (262aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4E911_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36277.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L2_038_000M1_scaffold_771_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14519..15505
DNA (987bp) protein (329aa)
DNA mismatch endonuclease Vsr n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9A7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74381.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA mismatch endonuclease Vsr
L2_038_000M1_scaffold_771_12
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15826..16731
DNA (906bp) protein (302aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4K7_9ACTN
L2_038_000M1_scaffold_771_13
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16689..16979
DNA (291bp) protein (97aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D4K7_9ACTN
L2_038_000M1_scaffold_771_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17113..18552
DNA (1440bp) protein (480aa)
Amino acid permease n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z881_9ACTN
Amino acid permease {ECO:0000313|EMBL:CDA35065.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid transporter protein
L2_038_000M1_scaffold_771_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18921..20126
DNA (1206bp) protein (402aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Putative agmatine deiminase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEV8_9ACTN
agmatine deiminase
L2_038_000M1_scaffold_771_16
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20673..22082
DNA (1410bp) protein (470aa)
Amino acid permease-associated region n=1 Tax=Collinsella sp. CAG:289 RepID=R7D6M7_9ACTN
Amino acid permease-associated region {ECO:0000313|EMBL:CDD85167.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
PotE; amino acid transporter
L2_038_000M1_scaffold_771_17
unknown

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comp(22118..22309)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_038_000M1_scaffold_771_18
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22438..23232
DNA (795bp) protein (265aa)
Transcriptional regulator LuxR family n=1 Tax=Collinsella sp. CAG:289 RepID=R7D662_9ACTN
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDD85017.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
transcriptional regulator
L2_038_000M1_scaffold_771_19
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23181..23429
DNA (249bp) protein (83aa)
Transcriptional regulator LuxR family n=1 Tax=Collinsella sp. CAG:289 RepID=R7D662_9ACTN
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDD85017.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
transcriptional regulator
L2_038_000M1_scaffold_771_20
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23745..25373
DNA (1629bp) protein (543aa)
Amidohydrolase 3 n=1 Tax=Collinsella sp. CAG:289 RepID=R7D3T7_9ACTN
Amidohydrolase 3 {ECO:0000313|EMBL:CDD85015.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
amidohydrolase
L2_038_000M1_scaffold_771_21
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25461..26837
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5D7_9ACTN
MATE efflux family protein {ECO:0000313|EMBL:CDD85013.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
multi antimicrobial extrusion protein MatE
L2_038_000M1_scaffold_771_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27021..28235
DNA (1215bp) protein (405aa)
AAA domain protein n=3 Tax=Bifidobacterium longum RepID=I3ASM0_BIFLN
AAA domain protein {ECO:0000313|EMBL:KFI63821.1}; Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ30069.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
AAA+ superfamily ATPase
L2_038_000M1_scaffold_771_23
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28608..29411)
DNA (804bp) protein (268aa)
Transcriptional regulator LuxR family n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7P6_9ACTN
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDD85803.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
LuxR family transcriptional regulator
L2_038_000M1_scaffold_771_24
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29590..30711
DNA (1122bp) protein (374aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
Putative agmatine deiminase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D626_9ACTN
agmatine deiminase
L2_038_000M1_scaffold_771_25
unknown

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30767..31042
DNA (276bp) protein (92aa)

This feature has no annotations

L2_038_000M1_scaffold_771_26
unknown

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31008..31613
DNA (606bp) protein (202aa)

This feature has no annotations

L2_038_000M1_scaffold_771_27
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31658..32308)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D8J4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85807.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
Hypothetical protein in acetyl transferase family
L2_038_000M1_scaffold_771_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32563..33747)
DNA (1185bp) protein (395aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFH1_9ACTN
L2_038_000M1_scaffold_771_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34052..35908)
DNA (1857bp) protein (619aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E918_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39763.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_038_000M1_scaffold_771_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35908..38277)
DNA (2370bp) protein (790aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5N3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36427.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
Displaying items 1-30 of 64 in total

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