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L2_038_000M1_scaffold_870

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_870_1
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1641
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KN12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB76568.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Phage-related protein, tail component
L2_038_000M1_scaffold_870_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1638..1793
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65294.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_870_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1786..1932
DNA (147bp) protein (49aa)
Uncharacterized protein XkdX n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SVN3_9FIRM
Uncharacterized protein XkdX {ECO:0000313|EMBL:CDC65288.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
AraC family transcriptional regulator
L2_038_000M1_scaffold_870_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1932..2399
DNA (468bp) protein (156aa)
Toxin secretion/phage lysis holin n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L520_9FIRM
hol; holin
Holin {ECO:0000313|EMBL:CCO05267.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2403..2696
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68603.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L2_038_000M1_scaffold_870_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2668..2937
DNA (270bp) protein (90aa)
Glycosyl hydrolase family 25 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0W6_9FIRM
endolysin (Glycoside Hydrolase Family 25 protein )
Endolysin (Glycoside Hydrolase Family 25 protein ) {ECO:0000313|EMBL:CCO06275.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3315..4481
DNA (1167bp) protein (389aa)
Beta-lactamase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDH1_9FIRM
Beta-lactamase {ECO:0000313|EMBL:CDC67739.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
putative Beta-lactamase
L2_038_000M1_scaffold_870_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4500..5936
DNA (1437bp) protein (479aa)
Hydrophobic domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2R5_9FIRM
Hydrophobic domain protein {ECO:0000313|EMBL:CDC67738.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_038_000M1_scaffold_870_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6021..6275
DNA (255bp) protein (85aa)
Preprotein translocase SecG subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAB0_9FIRM
secG; preprotein translocase, SecG subunit
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDC67737.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_870_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6346..8457
DNA (2112bp) protein (704aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
rnr; ribonuclease R (EC: (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6A5_9FIRM
L2_038_000M1_scaffold_870_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8748..11159)
DNA (2412bp) protein (804aa)
Glycogen/starch phosphorylase {ECO:0000313|EMBL:CCO06148.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CCO06148.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
glgP; Glycogen/starch phosphorylase (EC:2.4.1.1)
Phosphorylase glycogen/starch/alpha-glucan family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDG7_9FIRM
L2_038_000M1_scaffold_870_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11731..12606)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2R0_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO06149.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12652..13545)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06150.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13640..14740)
DNA (1101bp) protein (367aa)
FemAB family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIP2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06151.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15557..17095)
DNA (1539bp) protein (513aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
Ferredoxin hydrogenase, large subunit {ECO:0000313|EMBL:CCO06153.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CCO06153.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6A0_9FIRM
L2_038_000M1_scaffold_870_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17513..17977
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67729.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_870_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17974..19218
DNA (1245bp) protein (415aa)
Phage terminase large subunit PBSX family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Q4_9FIRM
phage terminase large subunit
Phage terminase large subunit {ECO:0000313|EMBL:CCO06155.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19252..20418
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67727.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_870_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20415..21251
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIN5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06157.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21484..22458
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T694_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67725.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_038_000M1_scaffold_870_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22521..22901
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67724.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_038_000M1_scaffold_870_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22917..23339
DNA (423bp) protein (141aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06160.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23332..23676
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAA1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06161.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23676..24584
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIN0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06162.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24659..25540)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T688_9FIRM
sugar transport system permease protein
Sugar transport system permease protein {ECO:0000313|EMBL:CCO06163.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25547..26476)
DNA (930bp) protein (310aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDF2_9FIRM
sugar transport system permease protein
Sugar transport system permease protein {ECO:0000313|EMBL:CCO06164.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26570..28084)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P1_9FIRM
ABC transporter extracellular-binding protein
ABC transporter extracellular-binding protein {ECO:0000313|EMBL:CCO06165.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_038_000M1_scaffold_870_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28163..29173)
DNA (1011bp) protein (337aa)
Transcriptional regulator LacI family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UA98_9FIRM
Transcriptional regulator, LacI family
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDC67717.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_038_000M1_scaffold_870_29
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30540..32156
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CC94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74248.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
arp; ankyrin repeat-containing protein
L2_038_000M1_scaffold_870_30
unknown

Not on your lists

32284..32445
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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