ggKbase home page

L2_038_000M1_scaffold_988

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_988_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..265
DNA (264bp) protein (88aa)
Resolvase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC99_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERJ96136.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
resolvase/recombinase
L2_038_000M1_scaffold_988_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(790..2082)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M313_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96139.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2278..3777
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96140.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3798..5540
DNA (1743bp) protein (581aa)
Helicase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV33_9FIRM
Helicase protein {ECO:0000313|EMBL:ERJ96142.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5671..5898
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96143.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_038_000M1_scaffold_988_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5926..6981
DNA (1056bp) protein (352aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M317_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ96144.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
integrase family protein
L2_038_000M1_scaffold_988_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7035..7715)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9S9L5_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC04031.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L2_038_000M1_scaffold_988_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7702..8961)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96146.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC transporter ATP-binding protein
L2_038_000M1_scaffold_988_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9239..9640)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV38_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
SSU ribosomal protein S9P
L2_038_000M1_scaffold_988_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9659..10087)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA15_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
LSU ribosomal protein L13P
L2_038_000M1_scaffold_988_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10454..10792
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M321_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96149.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_12
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10982..11173)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7F9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE11238.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L2_038_000M1_scaffold_988_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11301..13175
DNA (1875bp) protein (625aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV23_9FIRM
Asparagine synthase {ECO:0000313|EMBL:ERJ96132.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13194..13862
DNA (669bp) protein (223aa)
HD domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MA03_9FIRM
HD domain protein {ECO:0000313|EMBL:ERJ96133.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_038_000M1_scaffold_988_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13950..15035
DNA (1086bp) protein (362aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M308_9FIRM
Aspartate carbamoyltransferase {ECO:0000313|EMBL:ERJ96134.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15540..15941)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96106.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted membrane protein
L2_038_000M1_scaffold_988_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16065..17654
DNA (1590bp) protein (530aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV05_9FIRM
L2_038_000M1_scaffold_988_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17651..20017
DNA (2367bp) protein (789aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M9Y5_9FIRM
L2_038_000M1_scaffold_988_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20047..20421
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M2Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96109.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20551..21735)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96110.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21904..24138)
DNA (2235bp) protein (745aa)
DEAD/DEAH box helicase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC77_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:ERJ96111.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DEAD/DEAH box helicase
L2_038_000M1_scaffold_988_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24187..25506)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96112.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
biotin carboxylase
L2_038_000M1_scaffold_988_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25635..27200)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M2Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96114.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_038_000M1_scaffold_988_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27594..28994
DNA (1401bp) protein (467aa)
Putative pyruvate carboxylase subunit B n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVM5_9FIRM
Putative pyruvate carboxylase subunit B {ECO:0000313|EMBL:ERJ96115.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_038_000M1_scaffold_988_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29007..29384
DNA (378bp) protein (126aa)
Sodium pump decarboxylase, gamma subunit n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC82_9FIRM
Sodium pump decarboxylase, gamma subunit {ECO:0000313|EMBL:ERJ96116.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29374..29772
DNA (399bp) protein (133aa)
Glutaconyl-CoA decarboxylase subunit gamma n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV12_9FIRM
Glutaconyl-CoA decarboxylase subunit gamma {ECO:0000313|EMBL:ERJ96117.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
glutaconyl-CoA decarboxylase subunit gamma
L2_038_000M1_scaffold_988_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29786..31012
DNA (1227bp) protein (409aa)
Na(+)-transporting decarboxylase (EC:4.1.1.-)
Putative glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M9Z3_9FIRM
Putative glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:ERJ96118.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31366..33225)
DNA (1860bp) protein (620aa)
Cell wall-binding repeat protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KVN0_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:ERJ96120.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_038_000M1_scaffold_988_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33588..34487)
DNA (900bp) protein (300aa)
N-carbamoylputrescine amidase (EC:3.5.1.53)
N-carbamoylputrescine amidase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KV17_9FIRM
N-carbamoylputrescine amidase {ECO:0000313|EMBL:ERJ96122.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_038_000M1_scaffold_988_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34480..35595)
DNA (1116bp) protein (372aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M9Z7_9FIRM
Displaying items 1-30 of 43 in total

View Taxonomy