ggKbase home page

L2_038_000M1_scaffold_1343

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_1343_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1040)
-----------------
DNA (1038bp)
protein (346aa)
Ribosome-binding ATPase YchF n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL1_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
GTP-binding protein YchF
L2_038_000M1_scaffold_1343_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1222..2538)
-----------------
DNA (1317bp)
protein (439aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL2_9FIRM
L2_038_000M1_scaffold_1343_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2710..3810
-----------------
DNA (1101bp)
protein (367aa)
UPF0597 protein HMPREF9436_00447 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL4_9FIRM
UPF0597 protein HMPREF9436_00447 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_038_000M1_scaffold_1343_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3945..4547
-----------------
DNA (603bp)
protein (201aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ08036.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_038_000M1_scaffold_1343_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4547..6067
-----------------
DNA (1521bp)
protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL6_9FIRM
Signal transduction histidine kinase
L2_038_000M1_scaffold_1343_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6496..7146
-----------------
DNA (651bp)
protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL7_9FIRM
L2_038_000M1_scaffold_1343_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7161..8180
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08039.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
L2_038_000M1_scaffold_1343_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8177..8899
-----------------
DNA (723bp)
protein (241aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08040.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
L2_038_000M1_scaffold_1343_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8896..9507
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08041.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
L2_038_000M1_scaffold_1343_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9532..10611
-----------------
DNA (1080bp)
protein (360aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08042.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_038_000M1_scaffold_1343_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10645..11937
-----------------
DNA (1293bp)
protein (431aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08043.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_038_000M1_scaffold_1343_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11951..13867
-----------------
DNA (1917bp)
protein (639aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
DEAD/DEAH box helicase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM3_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFQ08044.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_038_000M1_scaffold_1343_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13864..14712
-----------------
DNA (849bp)
protein (283aa)
Methyltransferase domain. (EC:2.1.1.51)
Methyltransferase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM4_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EFQ08045.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_038_000M1_scaffold_1343_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15032..15685)
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08046.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted membrane protein
L2_038_000M1_scaffold_1343_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15900..17336
-----------------
DNA (1437bp)
protein (479aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFM6_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ08047.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator, GntR family
L2_038_000M1_scaffold_1343_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17243..18157)
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07814.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_038_000M1_scaffold_1343_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18234..18416
-----------------
DNA (183bp)
protein (61aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07813.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_038_000M1_scaffold_1343_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18848..20365
-----------------
DNA (1518bp)
protein (506aa)
Amino acid carrier protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG87_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EFQ07811.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid carrier protein
L2_038_000M1_scaffold_1343_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20465..21172
-----------------
DNA (708bp)
protein (236aa)
Transcriptional regulator, GntR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG86_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFQ07810.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
transcriptional regulator, GntR family
L2_038_000M1_scaffold_1343_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21478..22953
-----------------
DNA (1476bp)
protein (492aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Putative dihydroxy-acid dehydratase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG84_9FIRM
Putative dihydroxy-acid dehydratase {ECO:0000313|EMBL:EFQ07808.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Displaying 20 items

View Taxonomy