ggKbase home page

L2_038_000M1_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_168_1
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

994..1869
DNA (876bp) protein (292aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
Diaminopimelate epimerase n=4 Tax=Acidaminococcus RepID=G4Q5X1_ACIIR
L2_038_000M1_scaffold_168_2
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2012..3211
DNA (1200bp) protein (400aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=5 Tax=Acidaminococcus RepID=G4Q5X2_ACIIR
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:AEQ21273.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_3
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3280..3744
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q5X3_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21274.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_4
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3937..4776
DNA (840bp) protein (280aa)
ParA family protein n=4 Tax=Acidaminococcus RepID=C0WB43_9FIRM
ATPase {ECO:0000313|EMBL:CDB96123.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
ATPase
L2_038_000M1_scaffold_168_5
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4867..5487
DNA (621bp) protein (207aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q5X5_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21276.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_6
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5833..6846
DNA (1014bp) protein (338aa)
aroA; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=4 Tax=Acidaminococcus RepID=C0WB41_9FIRM
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CDB96118.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_7
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6893..7759
DNA (867bp) protein (289aa)
prephenate dehydrogenase tyrA (EC:1.3.1.12)
Prephenate dehydrogenase tyrA n=5 Tax=Acidaminococcus RepID=G4Q5X7_ACIIR
Prephenate dehydrogenase tyrA {ECO:0000313|EMBL:AEQ21278.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_8
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7746..8816
DNA (1071bp) protein (357aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=3 Tax=Acidaminococcus RepID=C0WB39_9FIRM
L2_038_000M1_scaffold_168_9
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8813..10090
DNA (1278bp) protein (426aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Acidaminococcus RepID=R6NE26_9FIRM
L2_038_000M1_scaffold_168_10
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10087..11178
DNA (1092bp) protein (364aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2U0I6_9FIRM
L2_038_000M1_scaffold_168_11
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11178..12026
DNA (849bp) protein (283aa)
pheA; chorismate mutase (EC:4.2.1.51)
Chorismate mutase n=4 Tax=Acidaminococcus RepID=G4Q5Y1_ACIIR
Chorismate mutase {ECO:0000313|EMBL:AEQ21282.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_12
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12048..12881
DNA (834bp) protein (278aa)
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=3 Tax=Acidaminococcus RepID=G4Q5Y2_ACIIR
Shikimate dehydrogenase {ECO:0000313|EMBL:AEQ21283.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_13
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12874..13371
DNA (498bp) protein (166aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Shikimate kinase n=4 Tax=Acidaminococcus RepID=G4Q5Y3_ACIIR
L2_038_000M1_scaffold_168_14
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13505..14452
DNA (948bp) protein (316aa)
hmgL; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Hydroxymethylglutaryl-CoA lyase n=4 Tax=Acidaminococcus RepID=G4Q5Y4_ACIIR
HMGL-like protein {ECO:0000313|EMBL:EEH90315.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L2_038_000M1_scaffold_168_15
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14907..15713
DNA (807bp) protein (269aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=G4Q5Y6_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21287.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_16
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15733..16593
DNA (861bp) protein (287aa)
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Shikimate dehydrogenase n=4 Tax=Acidaminococcus RepID=G4Q5Y7_ACIIR
L2_038_000M1_scaffold_168_17
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16624..17178
DNA (555bp) protein (185aa)
TRAP dicarboxylate transporter n=4 Tax=Acidaminococcus RepID=G4Q5Y8_ACIIR
dctQ; TRAP dicarboxylate transporter
TRAP dicarboxylate transporter {ECO:0000313|EMBL:CDB96068.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_18
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17178..18476
DNA (1299bp) protein (433aa)
Uncharacterized protein n=3 Tax=Acidaminococcus RepID=G4Q5Y9_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21290.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_19
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18541..19617
DNA (1077bp) protein (359aa)
Sialic acid-binding periplasmic protein siaP n=3 Tax=Acidaminococcus RepID=G4Q5Z0_ACIIR
sialic acid-binding periplasmic protein siaP
Sialic acid-binding periplasmic protein siaP {ECO:0000313|EMBL:CDB96059.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_20
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19654..20541
DNA (888bp) protein (296aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q5Z1_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21292.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_21
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20592..21524
DNA (933bp) protein (311aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q5Z2_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB96052.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_22
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21529..23364
DNA (1836bp) protein (612aa)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit n=4 Tax=Acidaminococcus RepID=G4Q5Z3_ACIIR
Acetolactate synthase large subunit {ECO:0000313|EMBL:CDB96048.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_23
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23541..24422
DNA (882bp) protein (294aa)
prpB; carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:4.1.3.30)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=4 Tax=Acidaminococcus RepID=G4Q5Z4_ACIIR
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:CDB96043.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_24
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24449..24925
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=R6MP92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96041.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_25
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25096..25224
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Acidaminococcus intestini (strain RyC-MR95) RepID=G4Q5Z6_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21297.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_26
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25321..26217)
DNA (897bp) protein (299aa)
Transcriptional regulator n=4 Tax=Acidaminococcus RepID=G4Q5Z7_ACIIR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDB96035.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_038_000M1_scaffold_168_27
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26501..27937
DNA (1437bp) protein (479aa)
adhE; succinate-semialdehyde dehydrogenase (EC:1.1.1.1 1.2.1.10)
Succinate-semialdehyde dehydrogenase n=4 Tax=Acidaminococcus RepID=G4Q5Z8_ACIIR
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEQ21299.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_28
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28151..28951
DNA (801bp) protein (267aa)
ATPase n=4 Tax=Acidaminococcus RepID=G4Q5Z9_ACIIR
ATPase
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEH90303.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
L2_038_000M1_scaffold_168_29
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28953..30146
DNA (1194bp) protein (398aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q600_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ21301.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L2_038_000M1_scaffold_168_30
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30204..30959)
DNA (756bp) protein (252aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=2 Tax=Acidaminococcus RepID=R6MJ92_9FIRM
Displaying items 1-30 of 82 in total

View Taxonomy