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L2_038_000M1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_39_1
unknown

Not on your lists

44..553
DNA (510bp) protein (170aa)

This feature has no annotations

L2_038_000M1_scaffold_39_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(728..4171)
DNA (3444bp) protein (1148aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003622280
Glycosyl hydrolases 38-like protein {ECO:0000313|EMBL:CDD25392.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_038_000M1_scaffold_39_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4187..5113)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNZ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25393.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_038_000M1_scaffold_39_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5136..6779)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000379133F
Uncharacterized protein {ECO:0000313|EMBL:CDD25394.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
carbohydrate-binding protein SusD
L2_038_000M1_scaffold_39_5
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6802..9492)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000378D387
Uncharacterized protein {ECO:0000313|EMBL:CDC97981.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
membrane protein
L2_038_000M1_scaffold_39_6
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10193..10672
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7JZ55_CYAP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK67266.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
L2_038_000M1_scaffold_39_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10582..13344)
DNA (2763bp) protein (921aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9S6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25401.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycoside hydrolase
L2_038_000M1_scaffold_39_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13441..15207)
DNA (1767bp) protein (589aa)
ROK family transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI000372C63C
Putative mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CDD25402.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
pmi; mannose-6-phosphate isomerase
L2_038_000M1_scaffold_39_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15221..16123)
DNA (903bp) protein (301aa)
ROK family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XP00_9BACT
ROK family protein {ECO:0000313|EMBL:CDD25403.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ROK family transcriptional regulator
L2_038_000M1_scaffold_39_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16143..18491)
DNA (2349bp) protein (783aa)
Putative alpha-1 2-mannosidase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2A6_9BACT
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDD25404.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_038_000M1_scaffold_39_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18580..19734)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035E3052
Uncharacterized protein {ECO:0000313|EMBL:CDD25405.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
fucose permease
L2_038_000M1_scaffold_39_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19752..20483)
DNA (732bp) protein (244aa)
GntR family transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI00037EBA2B
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:CDD25406.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator, GntR family
L2_038_000M1_scaffold_39_13
unknown

Not on your lists

comp(21280..21780)
DNA (501bp) protein (167aa)

This feature has no annotations

L2_038_000M1_scaffold_39_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21910..22941)
DNA (1032bp) protein (344aa)
2-oxoacid:ferredoxin oxidoreductase, beta subunit n=2 Tax=Alistipes RepID=I3YHJ7_ALIFI
2-oxoacid:ferredoxin oxidoreductase subunit beta
2-oxoacid:ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:AFL76465.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_038_000M1_scaffold_39_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22946..24790)
DNA (1845bp) protein (615aa)
MFS transporter n=1 Tax=Alistipes onderdonkii RepID=UPI0003637CC2
2-oxoacid:acceptor oxidoreductase alpha subunit {ECO:0000313|EMBL:CDD25408.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
2-oxoacid:acceptor oxidoreductase subunit alpha
L2_038_000M1_scaffold_39_16
unknown

Not on your lists

comp(24964..25479)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037E8365
L2_038_000M1_scaffold_39_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25534..26457)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036FCB31
Uncharacterized protein {ECO:0000313|EMBL:CDD25409.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Protein of unknown function DUF88.
L2_038_000M1_scaffold_39_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26812..27483)
DNA (672bp) protein (224aa)
Cro/Cl family transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI00037041FE
Predicted transcriptional regulator {ECO:0000313|EMBL:CDD25410.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Predicted transcriptional regulator
L2_038_000M1_scaffold_39_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27627..27911
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9T7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25411.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_038_000M1_scaffold_39_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28023..29762
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4I8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25412.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
phage uncharacterized protein (putative large terminase), C-terminal domain
L2_038_000M1_scaffold_39_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29785..30333)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHJ1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75789.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_038_000M1_scaffold_39_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30602..31696
DNA (1095bp) protein (365aa)
2-nitropropane dioxygenase-like enzyme n=1 Tax=Alistipes sp. CAG:29 RepID=R6XP08_9BACT
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:CDD25413.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
2-nitropropane dioxygenase
L2_038_000M1_scaffold_39_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32143..33198)
DNA (1056bp) protein (352aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
galactose mutarotase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XN29_9BACT
L2_038_000M1_scaffold_39_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33200..34735)
DNA (1536bp) protein (512aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Glutamate--tRNA ligase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1E9_9BACT
glutamyl-tRNA synthetase
L2_038_000M1_scaffold_39_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34830..35015)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003751878
Uncharacterized protein {ECO:0000313|EMBL:CDD25045.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_038_000M1_scaffold_39_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35073..36173)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8U1_9BACT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
GTP-binding protein YchF
L2_038_000M1_scaffold_39_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36366..38363)
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003822F8B
Uncharacterized protein {ECO:0000313|EMBL:CDD25047.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycoside hydrolase
L2_038_000M1_scaffold_39_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38489..38929)
DNA (441bp) protein (147aa)
transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI0003747EBE
Transcriptional regulator {ECO:0000313|EMBL:CDD25048.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcriptional regulator
L2_038_000M1_scaffold_39_29
unknown

Not on your lists

39027..39695
DNA (669bp) protein (223aa)

This feature has no annotations

L2_038_000M1_scaffold_39_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39881..42892
DNA (3012bp) protein (1004aa)
Putative alpha-1 2-mannosidase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1F2_9BACT
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDD25049.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
alpha-1,2-mannosidase
Displaying items 1-30 of 249 in total

View Taxonomy