ggKbase home page

L2_038_000M1_scaffold_578

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_578_1
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..2200
DNA (2199bp) protein (733aa)
Repeat protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A882_BIFAD
Cell surface protein {ECO:0000313|EMBL:KFI98333.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2337..3296
DNA (960bp) protein (320aa)
Sortase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A880_BIFAD
Sortase family protein {ECO:0000313|EMBL:EDN81946.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
sortase
L2_038_000M1_scaffold_578_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3490..6585
DNA (3096bp) protein (1032aa)
SCP-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A879_BIFAD
Cysteine-rich secretory family protein {ECO:0000313|EMBL:KFI98331.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
TPR repeat-containing protein
L2_038_000M1_scaffold_578_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6730..7671
DNA (942bp) protein (314aa)
Fic family protein {ECO:0000313|EMBL:KFI98330.1}; EC=2.7.7.- {ECO:0000313|EMBL:KFI98330.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Fic family protein n=2 Tax=Bifidobacterium dentium RepID=D2Q6S2_BIFDB
fic; fic family protein
L2_038_000M1_scaffold_578_5
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7919..9238
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVT4_BIFLJ
HipA-like domain-containing protein {ECO:0000313|EMBL:KFI98329.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9639..9887
DNA (249bp) protein (83aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1SBH2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIM00801.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_038_000M1_scaffold_578_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9980..11713
DNA (1734bp) protein (578aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E1N8X0_9BIFI
ATP-binding protein {ECO:0000313|EMBL:KFI98322.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ATP-binding protein
L2_038_000M1_scaffold_578_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11756..13702
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SBH4_9BIFI
Type IV secretory pathway VirD4 protein family protein {ECO:0000313|EMBL:KFI98321.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_9
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13699..15186
DNA (1488bp) protein (496aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q703_9BIFI
LysR family transcriptional regulator {ECO:0000313|EMBL:KFI98320.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15183..16523
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q704_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98319.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16548..17303
DNA (756bp) protein (252aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1SBH7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIM00968.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_038_000M1_scaffold_578_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17310..17684
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI98316.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_038_000M1_scaffold_578_13
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17739..20270)
DNA (2532bp) protein (844aa)
N-6 DNA methylase {ECO:0000313|EMBL:KFI98315.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KFI98315.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
N-6 DNA methylase n=2 Tax=Bifidobacterium bifidum RepID=K2M4V3_BIFBI
N-6 DNA methylase
L2_038_000M1_scaffold_578_14
unknown

Not on your lists

20755..21660
DNA (906bp) protein (302aa)

This feature has no annotations

L2_038_000M1_scaffold_578_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22039..23313)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSQ2_BIFBI
hipa domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50478.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_038_000M1_scaffold_578_16
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23427..23711)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FD35_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEP21822.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
L2_038_000M1_scaffold_578_17
unknown

Not on your lists

comp(23698..24150)
DNA (453bp) protein (151aa)

This feature has no annotations

L2_038_000M1_scaffold_578_18
unknown

Not on your lists

comp(24170..24694)
DNA (525bp) protein (175aa)

This feature has no annotations

L2_038_000M1_scaffold_578_19
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24694..25068)
DNA (375bp) protein (125aa)
Putative addiction module antidote protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FD27_9BIFI
addiction module antitoxin
Addiction module antitoxin {ECO:0000313|EMBL:AIZ15353.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_038_000M1_scaffold_578_20
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25318..25959)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S5E0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98313.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26203..27186)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI98311.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_038_000M1_scaffold_578_22
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27314..37639)
DNA (10326bp) protein (3442aa)
SNF2-related protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WNI3_EGGLE
SNF2-like protein {ECO:0000313|EMBL:KFI98310.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
SNF2-like protein
L2_038_000M1_scaffold_578_23
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37663..37956)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI98309.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_038_000M1_scaffold_578_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37972..38691)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2U3_BIFAA
XRE family transcriptional regulator {ECO:0000313|EMBL:KFI98308.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_25
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38716..39675)
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S5B2_9BIFI
Methyl transferase type 11 {ECO:0000313|EMBL:KFI98307.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_038_000M1_scaffold_578_26
unknown

Not on your lists

comp(39692..40195)
DNA (504bp) protein (168aa)

This feature has no annotations

L2_038_000M1_scaffold_578_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40218..42155
DNA (1938bp) protein (646aa)
DNA topoisomerase III {ECO:0000313|EMBL:KFI98306.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KFI98306.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
DNA topoisomerase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSE0_BIFBR
DNA topoisomerase III
Displaying 27 items

View Taxonomy