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L2_038_000M1_scaffold_2132

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_2132_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..831)
DNA (831bp) protein (277aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Tyrosine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6B4_9FIRM
L2_038_000M1_scaffold_2132_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1223..2893)
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6B3_9FIRM
DNA replication and repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_038_000M1_scaffold_2132_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2912..3400)
DNA (489bp) protein (163aa)
Arginine repressor n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6B2_9FIRM
transcriptional regulator, ArgR family
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_038_000M1_scaffold_2132_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3421..4272)
DNA (852bp) protein (284aa)
Predicted sugar kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6B1_9FIRM
L2_038_000M1_scaffold_2132_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4304..5107)
DNA (804bp) protein (268aa)
Putative ribosomal RNA large subunit methyltransferase J n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFB9_9FIRM
Putative ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EDP19928.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hemolysin A
L2_038_000M1_scaffold_2132_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5104..6987)
DNA (1884bp) protein (628aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6B0_9FIRM
L2_038_000M1_scaffold_2132_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7036..7503)
DNA (468bp) protein (156aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6A9_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL03118.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_038_000M1_scaffold_2132_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7522..8403)
DNA (882bp) protein (294aa)
farnesyl-diphosphate synthase (EC:2.5.1.10 2.5.1.29)
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:CBL03117.1}; EC=2.5.1.10 {ECO:0000313|EMBL:CBL03117.1};; EC=2.5.1.29 {ECO:0000313|EMBL:CBL03117.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Farnesyl-diphosphate synthase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6A8_9FIRM
L2_038_000M1_scaffold_2132_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8403..8633)
DNA (231bp) protein (77aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Exonuclease VII small subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6A7_9FIRM
Exonuclease VII small subunit.
L2_038_000M1_scaffold_2132_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8611..9834)
DNA (1224bp) protein (408aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFC6_9FIRM
exodeoxyribonuclease VII large subunit
L2_038_000M1_scaffold_2132_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9822..10763)
DNA (942bp) protein (314aa)
Metallohydrolase, glycoprotease/Kae1 family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFC8_9FIRM
Metallohydrolase, glycoprotease/Kae1 family {ECO:0000313|EMBL:EDP19934.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
peptidase M22 glycoprotease
L2_038_000M1_scaffold_2132_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10760..11206)
DNA (447bp) protein (149aa)
N utilization substance protein B homolog n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6A6_9FIRM
transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_038_000M1_scaffold_2132_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11290..11649)
DNA (360bp) protein (120aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6A5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP19936.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_038_000M1_scaffold_2132_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11939..12247)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6A4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03113.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying 14 items

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