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L2_038_000M1_scaffold_1110

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_1110_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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930..1241
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNK2_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S10P
L2_038_000M1_scaffold_1110_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1422..2054
DNA (633bp) protein (211aa)
50S ribosomal protein L3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNK1_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L3P
L2_038_000M1_scaffold_1110_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2069..2689
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNK0_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L4P
L2_038_000M1_scaffold_1110_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2689..2982
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ9_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L23P
L2_038_000M1_scaffold_1110_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3086..3916
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ8_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L2P
L2_038_000M1_scaffold_1110_6

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3932..4207
DNA (276bp) protein (92aa)
Ribosomal protein S19, bacterial-type n=1 Tax=human gut metagenome RepID=K1RW22_9ZZZZ
Ribosomal protein S19, bacterial-type {ECO:0000313|EMBL:EKC52672.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SSU ribosomal protein S19P
L2_038_000M1_scaffold_1110_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4225..4560
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ6_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L22P
L2_038_000M1_scaffold_1110_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4573..5271
DNA (699bp) protein (233aa)
30S ribosomal protein S3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ5_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S3P
L2_038_000M1_scaffold_1110_9

Not on your lists


5271..5711
DNA (441bp) protein (147aa)
Ribosomal protein L16 n=1 Tax=human gut metagenome RepID=K1TIH9_9ZZZZ
Ribosomal protein L16 {ECO:0000313|EMBL:EKC67399.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
LSU ribosomal protein L16P
L2_038_000M1_scaffold_1110_10

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5708..5905
DNA (198bp) protein (66aa)
Ribosomal protein L29 n=1 Tax=human gut metagenome RepID=K1TCF7_9ZZZZ
Ribosomal protein L29 {ECO:0000313|EMBL:EKC67398.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
LSU ribosomal protein L29P
L2_038_000M1_scaffold_1110_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5921..6175
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ2_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S17P
L2_038_000M1_scaffold_1110_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6206..6574
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNJ1_9FIRM
LSU ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_038_000M1_scaffold_1110_13

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6587..6901
DNA (315bp) protein (105aa)
Ribosomal protein L24 n=1 Tax=human gut metagenome RepID=K1SNS7_9ZZZZ
Ribosomal protein L24 {ECO:0000313|EMBL:EKC62292.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
LSU ribosomal protein L24P
L2_038_000M1_scaffold_1110_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6916..7455
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI9_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Ribosomal protein L5
L2_038_000M1_scaffold_1110_15

Not on your lists


7473..7658
DNA (186bp) protein (62aa)
Ribosomal protein S14p/S29e n=2 Tax=organismal metagenomes RepID=K1T7L1_9ZZZZ
Ribosomal protein S14p/S29e {ECO:0000313|EMBL:EKC63499.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Ribosomal protein S14
L2_038_000M1_scaffold_1110_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7744..8142
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI7_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S8P
L2_038_000M1_scaffold_1110_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8160..8708
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI6_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L6P
L2_038_000M1_scaffold_1110_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8727..9086
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI5_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L18P
L2_038_000M1_scaffold_1110_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9103..9609
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI4_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S5P
L2_038_000M1_scaffold_1110_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9623..9802
DNA (180bp) protein (60aa)
Ribosomal protein L30 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI3_9FIRM
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L30P
L2_038_000M1_scaffold_1110_21

Not on your lists


9820..10257
DNA (438bp) protein (146aa)
Ribosomal protein L15, bacterial-type n=1 Tax=human gut metagenome RepID=K1RYX3_9ZZZZ
Ribosomal protein L15, bacterial-type {ECO:0000313|EMBL:EKC50528.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
LSU ribosomal protein L15P
L2_038_000M1_scaffold_1110_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10259..11557
DNA (1299bp) protein (433aa)
Protein translocase subunit SecY n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNI1_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
preprotein translocase subunit SecY
L2_038_000M1_scaffold_1110_23

Not on your lists

11602..12252
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000313|EMBL:EKC51818.1}; EC=2.7.4.- {ECO:0000313|EMBL:EKC51818.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=human gut metagenome RepID=K1S2C4_9ZZZZ
L2_038_000M1_scaffold_1110_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12260..13033
DNA (774bp) protein (258aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
map; Methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNH9_9FIRM
L2_038_000M1_scaffold_1110_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13021..13272
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76113.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_038_000M1_scaffold_1110_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13298..13534
DNA (237bp) protein (79aa)
Translation initiation factor IF-1 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNH7_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_038_000M1_scaffold_1110_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13567..13680
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNH6_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L36P
L2_038_000M1_scaffold_1110_28

Not on your lists


13794..14165
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=1 Tax=human gut metagenome RepID=K1U171_9ZZZZ
30S ribosomal protein S13 {ECO:0000313|EMBL:EKC73654.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SSU ribosomal protein S13P
L2_038_000M1_scaffold_1110_29

Not on your lists


14178..14585
DNA (408bp) protein (136aa)
Ribosomal protein S11, bacterial-type n=1 Tax=human gut metagenome RepID=K1TV18_9ZZZZ
Ribosomal protein S11, bacterial-type {ECO:0000313|EMBL:EKC73653.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SSU ribosomal protein S11P
L2_038_000M1_scaffold_1110_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14606..15208
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9I0_9FIRM
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 1-30 of 38 in total

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