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L2_038_000M1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_18_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..696)
DNA (696bp) protein (232aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7AFB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EET14960.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_038_000M1_scaffold_18_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(942..2234)
DNA (1293bp) protein (431aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroidales RepID=G1UMD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA78504.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
integrase
L2_038_000M1_scaffold_18_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2194..3135)
DNA (942bp) protein (314aa)
DNA binding domain, excisionase family n=3 Tax=Bacteroidales RepID=A7AFB5_9PORP
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDN86741.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transposase
L2_038_000M1_scaffold_18_4
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3567..5030)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NT99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00581.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_038_000M1_scaffold_18_5
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5027..6055)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N945_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00580.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_038_000M1_scaffold_18_6
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6071..7669)
DNA (1599bp) protein (533aa)
O-antigen polymerase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEY6_9BACT
O-antigen polymerase {ECO:0000313|EMBL:CCZ00579.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_18_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7890..9326
DNA (1437bp) protein (479aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUK1_9BACT
L2_038_000M1_scaffold_18_8
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9341..10858
DNA (1518bp) protein (506aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NT94_9BACT
L2_038_000M1_scaffold_18_9
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10855..11586
DNA (732bp) protein (244aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N940_9BACT
6-phosphogluconolactonase {ECO:0000313|EMBL:CCZ00575.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_038_000M1_scaffold_18_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11570..12595)
DNA (1026bp) protein (342aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroidetes RepID=F3Y496_9FLAO
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EHG99561.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
glycoside hydrolase
L2_038_000M1_scaffold_18_11
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12619..13680)
DNA (1062bp) protein (354aa)
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.- {ECO:0000256|SAAS:SAAS00272647};; EC=4.2.3.4 {ECO:0000256|SAAS:SAAS00210855};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
3-dehydroquinate synthase n=3 Tax=Bacteroidetes RepID=F3Y495_9FLAO
3-dehydroquinate synthase
L2_038_000M1_scaffold_18_12
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13893..16856
DNA (2964bp) protein (988aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y494_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99559.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L2_038_000M1_scaffold_18_13
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17020..18486
DNA (1467bp) protein (489aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Phospholipase D domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NT89_9BACT
cardiolipin synthetase
L2_038_000M1_scaffold_18_14
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18458..19012)
DNA (555bp) protein (185aa)
RNA methyltransferase RsmD family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N936_9BACT
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CCZ00570.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
RsmD family RNA methyltransferase
L2_038_000M1_scaffold_18_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19027..19842)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEX8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00569.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_18_16
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19823..20497)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3Y490_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99555.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L2_038_000M1_scaffold_18_17
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20594..22030
DNA (1437bp) protein (479aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y489_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99554.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ATP-dependent exodeoxyribonuclease
L2_038_000M1_scaffold_18_18
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(22349..24964)
DNA (2616bp) protein (872aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
Alanine--tRNA ligase n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QY75_9BACT
alanyl-tRNA synthetase
L2_038_000M1_scaffold_18_19
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25075..25422
DNA (348bp) protein (116aa)
Transcriptional regulator, MerR family n=2 Tax=Bacteroidetes RepID=F3Y487_9FLAO
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EHG99551.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
transcriptional regulator
L2_038_000M1_scaffold_18_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25454..27709)
DNA (2256bp) protein (752aa)
RelA/SpoT family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEX6_9BACT
RelA/SpoT family protein {ECO:0000313|EMBL:CCZ00564.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
GTP pyrophosphokinase
L2_038_000M1_scaffold_18_21
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27740..29026)
DNA (1287bp) protein (429aa)
Transglycosylase SLT domain protein n=3 Tax=Bacteroidetes RepID=F3Y485_9FLAO
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EHG99549.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
transglycosylase SLT/LysM domain-containing protein
L2_038_000M1_scaffold_18_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29030..29869)
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=R5NUJ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00562.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_18_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29866..30759)
DNA (894bp) protein (298aa)
Putative stage 0 sporulation protein J n=3 Tax=Bacteroidetes RepID=F3Y482_9FLAO
Putative stage 0 sporulation protein J {ECO:0000313|EMBL:CCZ00561.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
parB; putative ParB-like chromosome partitioning protein
L2_038_000M1_scaffold_18_24
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30771..31535)
DNA (765bp) protein (255aa)
Sporulation initiation inhibitor protein Soj n=3 Tax=Bacteroidetes RepID=F3Y481_9FLAO
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EHG99545.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ATPase involved in chromosome partitioning
L2_038_000M1_scaffold_18_25
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31742..32518
DNA (777bp) protein (259aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
5'-nucleotidase SurE n=2 Tax=Bacteroidetes RepID=F3Y480_9FLAO
multifunctional protein surE
L2_038_000M1_scaffold_18_26
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32515..33690
DNA (1176bp) protein (392aa)
putative lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=2 Tax=Bacteroidetes RepID=F3Y479_9FLAO
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EHG99543.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L2_038_000M1_scaffold_18_27
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33800..34651)
DNA (852bp) protein (284aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
putative phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=2 Tax=Bacteroidetes RepID=F3Y478_9FLAO
L2_038_000M1_scaffold_18_28
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34648..36735)
DNA (2088bp) protein (696aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Bacteroidetes RepID=F3Y477_9FLAO
cell division protein FtsH
L2_038_000M1_scaffold_18_29
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36754..37113)
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=3 Tax=Bacteroidetes RepID=F3Y476_9FLAO
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
iojap-like protein
L2_038_000M1_scaffold_18_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38232..39857)
DNA (1626bp) protein (542aa)
TvBspA-like-625 n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NA16_9BACT
TvBspA-like-625 {ECO:0000313|EMBL:CCZ00553.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
Displaying items 1-30 of 168 in total

View Taxonomy