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L2_038_000M1_scaffold_399

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_399_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..235
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7AFB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EET14960.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
conserved hypothetical protein probably involved in transposition
L2_038_000M1_scaffold_399_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

430..792
DNA (363bp) protein (121aa)
DNA binding domain, excisionase family n=3 Tax=Bacteroidales RepID=A7AFB8_9PORP
DNA binding domain, excisionase family {ECO:0000313|EMBL:EET14961.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
putative excisionase
L2_038_000M1_scaffold_399_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

798..1937
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7AFB9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EET14962.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_038_000M1_scaffold_399_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2099..3211
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z254_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET14963.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_038_000M1_scaffold_399_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3498..4964
DNA (1467bp) protein (489aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7AFC1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86747.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
mobilization protein
L2_038_000M1_scaffold_399_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5030..6082)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7AFC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86748.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_038_000M1_scaffold_399_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6151..9279)
DNA (3129bp) protein (1043aa)
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=3 Tax=Bacteroidales RepID=A7AFC3_9PORP
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EDN86749.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_038_000M1_scaffold_399_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9272..9757)
DNA (486bp) protein (162aa)
Type I restriction modification DNA specificity domain protein n=3 Tax=Bacteroidales RepID=A7AFC4_9PORP
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDN86750.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
restriction modification system DNA specificity domain-containing protein
L2_038_000M1_scaffold_399_9
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9776..10177)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0F580_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF74622.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
L2_038_000M1_scaffold_399_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10184..11308)
DNA (1125bp) protein (375aa)
Type I restriction modification DNA specificity domain protein n=4 Tax=Bacteroidales RepID=A7AFC6_9PORP
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDN86752.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative type I restriction enzyme
L2_038_000M1_scaffold_399_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11319..12419)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A7AFC5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKA82862.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
hypothetical protein
L2_038_000M1_scaffold_399_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12427..13134)
DNA (708bp) protein (236aa)
Type I restriction modification DNA specificity domain protein n=4 Tax=Bacteroidales RepID=A7AFC6_9PORP
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDN86752.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
type I restriction modification DNA specificity domain protein
L2_038_000M1_scaffold_399_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13136..14128)
DNA (993bp) protein (331aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroidales RepID=A7AFC8_9PORP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EET14971.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
site-specific recombinase, phage integrase family
L2_038_000M1_scaffold_399_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14173..15714)
DNA (1542bp) protein (514aa)
Type I restriction-modification system, M subunit n=3 Tax=Bacteroidales RepID=K1FU99_BACFG
Putative type I restriction-modification system, M subunit {ECO:0000313|EMBL:EET14972.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
putative type I restriction-modification system, M subunit
L2_038_000M1_scaffold_399_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16353..17192
DNA (840bp) protein (280aa)
YD repeat protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NA40_9BACT
YD repeat protein {ECO:0000313|EMBL:CCZ00583.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_038_000M1_scaffold_399_16
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17253..17906
DNA (654bp) protein (218aa)
Conserved domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEZ0_9BACT
Conserved domain protein {ECO:0000313|EMBL:CCZ00584.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_038_000M1_scaffold_399_17
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17924..19861
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N948_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00585.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_399_18
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20471..21718
DNA (1248bp) protein (416aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NTA2_9BACT
L2_038_000M1_scaffold_399_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21715..22146
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00587.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_399_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22143..22958
DNA (816bp) protein (272aa)
ABC 3 transport family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NA44_9BACT
ABC 3 transport family protein {ECO:0000313|EMBL:CCZ00588.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
zinc ABC transporter permease
L2_038_000M1_scaffold_399_21
unknown

Not on your lists

comp(23014..23184)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_038_000M1_scaffold_399_22
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23245..25908
DNA (2664bp) protein (888aa)
Tetratricopeptide repeat protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEZ3_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CCZ00589.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
tetratricopeptide repeat protein
L2_038_000M1_scaffold_399_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25929..27482
DNA (1554bp) protein (518aa)
PglZ domain protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5N952_9BACT
PglZ domain protein {ECO:0000313|EMBL:CCZ00590.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
response regulator
L2_038_000M1_scaffold_399_24
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27497..27907
DNA (411bp) protein (137aa)
Hydrolase P-loop family n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NTA7_9BACT
Hydrolase P-loop family {ECO:0000313|EMBL:CCZ00591.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_399_25
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28424..28762)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NUL1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00592.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L2_038_000M1_scaffold_399_26
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28774..29088)
DNA (315bp) protein (105aa)
Thioredoxin n=4 Tax=Bacteroidetes RepID=F3QY39_9BACT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
thioredoxin
L2_038_000M1_scaffold_399_27
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29131..33081)
DNA (3951bp) protein (1317aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
DNA polymerase III alpha subunit n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NEZ8_9BACT
DNA polymerase III subunit alpha
L2_038_000M1_scaffold_399_28
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33272..33958
DNA (687bp) protein (229aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
phosphatidylserine decarboxylase precursor-related protein (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=3 Tax=Bacteroidetes RepID=F3XZQ9_9FLAO
L2_038_000M1_scaffold_399_29
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33970..34683
DNA (714bp) protein (238aa)
Putative CDP-diacylglycerol-serine O-phosphatidyltransferase n=3 Tax=Bacteroidetes RepID=R5NTB2_9BACT
Putative CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:CCZ00596.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase
L2_038_000M1_scaffold_399_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34739..34999
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=R5NUL5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00597.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Displaying items 1-30 of 50 in total

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