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L2_038_000M1_scaffold_667

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_667_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106..1545)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26056.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_667_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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1766..2536
DNA (771bp) protein (257aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
PHP domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQ97_9FIRM
PHP domain protein {ECO:0000313|EMBL:CDB87982.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L2_038_000M1_scaffold_667_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2533..3351
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27768.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Bacterial Ig-like domain (group 3).
L2_038_000M1_scaffold_667_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3365..4864
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HPC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27767.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
capsular exopolysaccharide family
L2_038_000M1_scaffold_667_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4873..6330
DNA (1458bp) protein (486aa)
Chain length determinant protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2P3_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:CDB27766.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
capsular exopolysaccharide family
L2_038_000M1_scaffold_667_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6462..7184)
DNA (723bp) protein (241aa)
Glutamine ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZT1_9FIRM
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB27234.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC transporter
L2_038_000M1_scaffold_667_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7171..7887)
DNA (717bp) protein (239aa)
ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GS11_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDB27235.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
polar amino acid ABC transporter inner membrane subunit
L2_038_000M1_scaffold_667_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7887..8663)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H167_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27236.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
family 3 extracellular solute-binding protein
L2_038_000M1_scaffold_667_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8903..10051)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27237.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_667_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10186..12768
DNA (2583bp) protein (861aa)
Putative translation elongation factor G n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP61_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:CDB27238.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
small GTP-binding protein domain
L2_038_000M1_scaffold_667_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12836..14029
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GS15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27240.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted oxidoreductases of the aldo/keto reductase family
L2_038_000M1_scaffold_667_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14081..15595)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46675.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_038_000M1_scaffold_667_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15592..16122)
DNA (531bp) protein (177aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q0M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55109.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_038_000M1_scaffold_667_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16245..18071
DNA (1827bp) protein (609aa)
Putative ABC transporter permease/ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0K3_9FIRM
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDB27479.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ABC transporter permease/ATP-binding protein
L2_038_000M1_scaffold_667_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18064..18849
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27478.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_667_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18869..19081
DNA (213bp) protein (71aa)
UPF0291 protein BN557_01027 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNL2_9FIRM
UPF0291 protein BN557_01027 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_667_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19081..20277
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H204_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27476.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_667_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20304..21017
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GSU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27475.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
2,5-didehydrogluconate reductase
L2_038_000M1_scaffold_667_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21760..22467)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27474.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_667_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22457..23116)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27473.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_667_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23443..23907
DNA (465bp) protein (155aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
MJ0936 family phosphodiesterase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNK7_9FIRM
hypothetical protein
L2_038_000M1_scaffold_667_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23923..24555
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GST5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27470.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_667_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24613..25146)
DNA (534bp) protein (178aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7U1_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI75591.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L2_038_000M1_scaffold_667_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25230..25889)
DNA (660bp) protein (220aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7U1_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI75591.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L2_038_000M1_scaffold_667_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26250..26630)
DNA (381bp) protein (127aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D286_9CLOT
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERI75592.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Excisionase from transposon Tn916.
L2_038_000M1_scaffold_667_26
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(26630..27631)
DNA (1002bp) protein (334aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
DNA polymerase III polC-type n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZIC5_9FIRM
L2_038_000M1_scaffold_667_27
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27628..28812)
DNA (1185bp) protein (395aa)
Hydrolase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTW0_9FIRM
Hydrolase {ECO:0000313|EMBL:CDE79203.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
beta-lactamase
L2_038_000M1_scaffold_667_28
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28827..29417)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KS65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79200.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L2_038_000M1_scaffold_667_29
unknown

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comp(29414..29743)
DNA (330bp) protein (110aa)

This feature has no annotations

L2_038_000M1_scaffold_667_30
unknown

Not on your lists

comp(29813..30715)
DNA (903bp) protein (301aa)

This feature has no annotations

Displaying items 1-30 of 72 in total

View Taxonomy