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L2_038_000M1_scaffold_1112

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_1112_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
RNA-binding protein Hfq n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMG2_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hfq; RNA chaperone hfq
L2_038_000M1_scaffold_1112_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(292..1230)
DNA (939bp) protein (313aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.8)
tRNA dimethylallyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV78_9FIRM
L2_038_000M1_scaffold_1112_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1253..3157)
DNA (1905bp) protein (635aa)
DNA mismatch repair protein MutL n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJG4_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
mutL; DNA mismatch repair protein MutL
L2_038_000M1_scaffold_1112_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3175..5775)
DNA (2601bp) protein (867aa)
DNA mismatch repair protein MutS n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHZ4_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
mutS; DNA mismatch repair protein MutS
L2_038_000M1_scaffold_1112_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5870..7282)
DNA (1413bp) protein (471aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWF1_9FIRM
miaB; isopentenyl-adenosine A37 tRNA methylthiolase
L2_038_000M1_scaffold_1112_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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7481..8257
DNA (777bp) protein (259aa)
rRNA methyltransferase (EC:2.1.1.-)
rRNA methyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2H9_9FIRM
rRNA methyltransferase {ECO:0000313|EMBL:CCX74455.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_038_000M1_scaffold_1112_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8273..10438
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26262.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1112_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10498..14391)
DNA (3894bp) protein (1298aa)
RND transporter HAE1/HME family permease protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL45_9FIRM
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDB26682.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
acriflavin resistance protein
L2_038_000M1_scaffold_1112_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14641..16416)
DNA (1776bp) protein (592aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY78_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB26684.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ABC-type multidrug transport system, ATPase and permease components
L2_038_000M1_scaffold_1112_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16615..17172
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26689.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1112_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17191..17727
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26688.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1112_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17746..18291
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26687.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1112_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18420..19619
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26690.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative flavoprotein
L2_038_000M1_scaffold_1112_14
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

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19989..20198
DNA (210bp) protein (70aa)
Transcriptional regulator XRE family n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJS02129.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
hypothetical protein
L2_038_000M1_scaffold_1112_15
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

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20214..21380
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZAT3_NODSP
HNH endonuclease {ECO:0000313|EMBL:AHJ30402.1}; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
HNH endonuclease
L2_038_000M1_scaffold_1112_16
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

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21380..22612
DNA (1233bp) protein (411aa)
DNA-cytosine methyltransferase {ECO:0000313|EMBL:AHJ30403.1}; EC=2.1.1.37 {ECO:0000313|EMBL:AHJ30403.1};; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
DNA-cytosine methyltransferase family protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZAT2_NODSP
DNA-cytosine methyltransferase
L2_038_000M1_scaffold_1112_17
unknown

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comp(22967..23077)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_038_000M1_scaffold_1112_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23154..23549
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95885.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_038_000M1_scaffold_1112_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23623..25278
DNA (1656bp) protein (552aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D6Y7_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI75276.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_038_000M1_scaffold_1112_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25452..26261
DNA (810bp) protein (270aa)
Putative metalloendopeptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW86_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CDB25511.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative metalloendopeptidase
L2_038_000M1_scaffold_1112_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26248..26865
DNA (618bp) protein (206aa)
Peptidase M50 family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJ90_9FIRM
Peptidase M50 family protein {ECO:0000313|EMBL:CDB25508.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
peptidase M50 family protein
L2_038_000M1_scaffold_1112_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26871..27407
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25506.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1112_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27459..27941
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25504.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1112_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28041..28349
DNA (309bp) protein (103aa)
Thioredoxin n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HHP5_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
thioredoxin
L2_038_000M1_scaffold_1112_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28573..29133
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25635.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1112_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29145..29666
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25634.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1112_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29685..31415
DNA (1731bp) protein (577aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
V-type ATP synthase alpha chain n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJI5_9FIRM
archaeal/vacuolar-type H+-ATPase subunit A
L2_038_000M1_scaffold_1112_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31429..32724
DNA (1296bp) protein (432aa)
V-type ATP synthase beta chain n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HI20_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
archaeal/vacuolar-type H+-ATPase subunit B
L2_038_000M1_scaffold_1112_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32735..33349
DNA (615bp) protein (205aa)
V-type ATPase D subunit n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWG9_9FIRM
V-type ATPase D subunit {ECO:0000313|EMBL:CDB25631.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
H(+)-transporting ATP synthase, vacuolar type, subunit D
L2_038_000M1_scaffold_1112_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33346..35184
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25629.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
archaeal/vacuolar-type H+-ATPase subunit I
Displaying items 1-30 of 50 in total

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