ggKbase home page

L2_038_000M1_scaffold_1126

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_038_000M1_scaffold_1126_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(185..2953)
DNA (2769bp) protein (923aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL51_9FIRM
L2_038_000M1_scaffold_1126_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(3329..3775)
DNA (447bp) protein (149aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative deaminase (EC:3.5.4.-)
Putative deaminase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0V1_9FIRM
L2_038_000M1_scaffold_1126_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3884..4147
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26634.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1126_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4135..4392
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26635.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1126_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4518..6257)
DNA (1740bp) protein (580aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZJ5_9FIRM
Glycosyl hydrolase family 2 {ECO:0000313|EMBL:CDB26636.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6254..7513)
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMG3_9FIRM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDB26638.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
major facilitator superfamily protein
L2_038_000M1_scaffold_1126_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7515..8240)
DNA (726bp) protein (242aa)
ExsB family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GY39_9FIRM
ExsB family protein {ECO:0000313|EMBL:CDB26639.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
PP-loop domain-containing protein
L2_038_000M1_scaffold_1126_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8473..8898
DNA (426bp) protein (142aa)
50S ribosomal protein L13 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZK0_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplM; 50S ribosomal protein L13
L2_038_000M1_scaffold_1126_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8913..9317
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL12_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpsI; 30S ribosomal protein S9
L2_038_000M1_scaffold_1126_10
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10243..12564
DNA (2322bp) protein (774aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GT61_9FIRM
L2_038_000M1_scaffold_1126_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12604..12810)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GWW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25771.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12954..13175)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25774.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13466..14038
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25778.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14065..15564
DNA (1500bp) protein (500aa)
Zn-dependent carboxypeptidase (EC:3.4.17.19)
Zn-dependent carboxypeptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMW5_9FIRM
Zn-dependent carboxypeptidase {ECO:0000313|EMBL:CDB25780.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15711..16388
DNA (678bp) protein (226aa)
Putative metalloendopeptidase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GJU0_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CDB25763.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative metalloendopeptidase
L2_038_000M1_scaffold_1126_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16866..17060
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GT27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27540.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17054..17416
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H274_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27541.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17413..18777
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27542.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Terminase-like family.
L2_038_000M1_scaffold_1126_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19067..19966
DNA (900bp) protein (300aa)
Beta-lactamase domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGR4_9FIRM
Beta-lactamase domain protein {ECO:0000313|EMBL:CDB25202.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hydrolase
L2_038_000M1_scaffold_1126_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20061..21512
DNA (1452bp) protein (484aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GV95_9FIRM
L2_038_000M1_scaffold_1126_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21704..23257
DNA (1554bp) protein (518aa)
cls; cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GL85_9FIRM
Cardiolipin synthase {ECO:0000313|EMBL:CDB25200.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23380..23760
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27467.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L2_038_000M1_scaffold_1126_23
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23773..25116
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27466.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Putative peptidoglycan-binding domain-containing protein
L2_038_000M1_scaffold_1126_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25294..26400)
DNA (1107bp) protein (369aa)
Predicted membrane protein putative toxin regulator n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GLJ8_9FIRM
Predicted membrane protein putative toxin regulator {ECO:0000313|EMBL:CDB26353.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted membrane protein, putative toxin regulator
L2_038_000M1_scaffold_1126_25
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26636..27643)
DNA (1008bp) protein (336aa)
Radical SAM additional 4Fe4S-binding domain protein n=2 Tax=Streptococcus mitis RepID=F9H9B6_STRMT
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:EGP70611.1}; TaxID=1008452 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK1073.;"
Radical SAM domain protein
L2_038_000M1_scaffold_1126_26
unknown

Not on your lists

comp(27630..27917)
DNA (288bp) protein (96aa)

This feature has no annotations

L2_038_000M1_scaffold_1126_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27985..28491)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26349.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_038_000M1_scaffold_1126_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28644..29006
DNA (363bp) protein (121aa)
Putative GntR family transcriptional regulator n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HIK9_9FIRM
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:CDB25832.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative GntR family transcriptional regulator
L2_038_000M1_scaffold_1126_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29008..29709
DNA (702bp) protein (234aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GVS8_9FIRM
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB25834.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ABC transporter ATP-binding protein
L2_038_000M1_scaffold_1126_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29699..30502
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GX34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25836.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy