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dasL2_039_000G1_concoct_77_fa

L2_039_000G1_public_Clostridiales_57_13
In projects: L2_039_000G1_public

Consensus taxonomy: Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 77 in total
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contig # features sequence size GC content (%) Cov Coding Density (%) notes
L2_039_000G1_scaffold_38
Order: Clostridiales (71.37%)
227 220155 bp 58.92 14.24 90.51
L2_039_000G1_scaffold_95
Order: Clostridiales (68.03%)
147 148679 bp 57.99 12.44 90.71
L2_039_000G1_scaffold_145
Species: Butyricicoccus pullicaecorum (67.88%)
137 119075 bp 61.18 13.95 90.45
L2_039_000G1_scaffold_99
Species: Butyricicoccus pullicaecorum (56.72%)
134 145498 bp 54.62 11.51 92.52
L2_039_000G1_scaffold_115
Species: Butyricicoccus pullicaecorum (52.24%)
134 135833 bp 61.18 13.56 90.99
L2_039_000G1_scaffold_135
Species: Butyricicoccus pullicaecorum (60.94%)
128 124699 bp 58.66 12.96 89.03
L2_039_000G1_scaffold_149
Order: Clostridiales (77.14%)
105 115175 bp 57.17 12.24 91.81
L2_039_000G1_scaffold_210
Order: Clostridiales (79.79%)
94 94904 bp 57.23 11.84 89.79
L2_039_000G1_scaffold_337
Order: Clostridiales (75%)
84 75366 bp 54.05 11.30 81.41
L2_039_000G1_scaffold_336
Species: Butyricicoccus pullicaecorum (73.42%)
79 75507 bp 58.27 12.47 91.93
L2_039_000G1_scaffold_339
Species: Butyricicoccus pullicaecorum (66.67%)
78 74956 bp 58.63 12.66 91.09
L2_039_000G1_scaffold_382
Order: Clostridiales (82.67%)
75 67932 bp 59.92 13.67 91.76
L2_039_000G1_scaffold_394
Order: Clostridiales (74.63%)
67 66608 bp 59.47 12.62 88.23
L2_039_000G1_scaffold_419
Order: Clostridiales (85%)
60 64286 bp 56.72 12.33 88.75
L2_039_000G1_scaffold_489
Order: Clostridiales (80.36%)
56 57688 bp 55.86 12.73 90.95
L2_039_000G1_scaffold_575
Order: Clostridiales (78.57%)
56 51685 bp 60.95 14.68 88.69
L2_039_000G1_scaffold_605
Order: Clostridiales (77.55%)
49 50169 bp 60.99 13.85 89.20
L2_039_000G1_scaffold_786
Order: Clostridiales (82.98%)
47 42208 bp 56.99 11.89 89.31
L2_039_000G1_scaffold_698
Species: Butyricicoccus pullicaecorum (73.33%)
45 45940 bp 57.08 12.67 92.67
L2_039_000G1_scaffold_863
Order: Clostridiales (62.79%)
43 39337 bp 55.90 12.48 84.95
L2_039_000G1_scaffold_1437
Order: Clostridiales (52.38%)
42 26231 bp 61.63 12.57 93.83
L2_039_000G1_scaffold_817
Order: Clostridiales (78.05%)
41 40941 bp 52.90 10.91 92.18
L2_039_000G1_scaffold_840
Order: Clostridiales (55%)
40 40021 bp 55.79 13.60 89.63
L2_039_000G1_scaffold_1068
Order: Clostridiales (76.92%)
39 33229 bp 57.82 12.76 87.25
L2_039_000G1_scaffold_1082
Species: Butyricicoccus pullicaecorum (51.35%)
37 32930 bp 58.17 13.89 87.52
L2_039_000G1_scaffold_1022
Order: Clostridiales (83.33%)
36 34354 bp 59.85 13.23 88.71
L2_039_000G1_scaffold_1064
Species: Butyricicoccus pullicaecorum (65.71%)
35 33295 bp 58.09 12.95 88.33
L2_039_000G1_scaffold_881
Order: Clostridiales (66.67%)
33 38516 bp 55.39 12.26 86.26
L2_039_000G1_scaffold_977
Order: Clostridiales (87.1%)
31 35510 bp 57.45 14.76 87.62
L2_039_000G1_scaffold_1417
Order: Clostridiales (62.07%)
29 26527 bp 55.69 11.65 92.81
L2_039_000G1_scaffold_1907
Phylum: Firmicutes (64.29%)
28 20276 bp 55.66 15.74 92.24
L2_039_000G1_scaffold_1800
Order: Clostridiales (59.26%)
27 21431 bp 54.98 12.79 84.20
L2_039_000G1_scaffold_1456
Order: Clostridiales (80.77%)
26 26011 bp 58.16 12.85 88.62
L2_039_000G1_scaffold_1782
Order: Clostridiales (72.73%)
22 21661 bp 57.29 12.33 91.71
L2_039_000G1_scaffold_1920
Order: Clostridiales (63.64%)
22 20173 bp 50.40 12.25 71.01
L2_039_000G1_scaffold_3311
Order: Clostridiales (52.38%)
21 11954 bp 55.50 11.48 93.61
L2_039_000G1_scaffold_1654
Order: Clostridiales (85%)
20 23225 bp 58.22 13.41 86.65
L2_039_000G1_scaffold_2287
Order: Clostridiales (94.74%)
19 17088 bp 59.45 12.62 92.15
L2_039_000G1_scaffold_2040
Domain: Bacteria (78.95%)
19 19092 bp 58.27 14.05 89.05
L2_039_000G1_scaffold_1358
Phylum: Firmicutes (68.42%)
19 27390 bp 49.36 11.69 81.49
L2_039_000G1_scaffold_2825
Order: Clostridiales (77.78%)
18 13976 bp 55.05 11.39 79.68
L2_039_000G1_scaffold_2101
Species: Butyricicoccus pullicaecorum (66.67%)
18 18622 bp 55.10 11.49 87.25
L2_039_000G1_scaffold_2490
Order: Clostridiales (82.35%)
17 15818 bp 59.83 12.96 79.14
L2_039_000G1_scaffold_2288
Species: Butyricicoccus pullicaecorum (64.71%)
17 17084 bp 55.94 10.91 89.93
L2_039_000G1_scaffold_2345
Species: Butyricicoccus pullicaecorum (50%)
16 16685 bp 56.37 12.03 82.66
L2_039_000G1_scaffold_2455
Order: Clostridiales (100%)
16 16031 bp 52.49 12.35 88.87
L2_039_000G1_scaffold_3269
Order: Clostridiales (92.86%)
14 12120 bp 54.08 12.02 79.63
L2_039_000G1_scaffold_2933
Order: Clostridiales (64.29%)
14 13491 bp 53.91 11.26 87.46
L2_039_000G1_scaffold_3360
Order: Clostridiales (78.57%)
14 11769 bp 61.59 12.59 91.23
L2_039_000G1_scaffold_2811
Order: Clostridiales (92.31%)
13 14027 bp 59.59 14.42 88.93
Displaying items 1-50 of 77 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.