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L2_039_000G1_scaffold_575

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Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000G1_scaffold_575_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(515..1366)
DNA (852bp) protein (284aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W477_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_000G1_scaffold_575_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1397..2344)
DNA (948bp) protein (316aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3U2_9CLOT
prolipoprotein diacylglyceryl transferase
L2_039_000G1_scaffold_575_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2375..3640)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8M7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39492.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
M16B family peptidase
L2_039_000G1_scaffold_575_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(3637..4920)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YBN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13017.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
peptidase M16B family protein
L2_039_000G1_scaffold_575_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5117..5488
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3K8_9CLOT
UPF0122 protein HMPREF1526_00184 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
helix-turn-helix protein YlxM/p13 family protein
L2_039_000G1_scaffold_575_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5490..6863
DNA (1374bp) protein (458aa)
Signal recognition particle protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W473_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ffh; signal recognition particle protein
L2_039_000G1_scaffold_575_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6935..7177
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=3 Tax=Clostridiales RepID=G9YNL4_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
30S ribosomal protein S16
L2_039_000G1_scaffold_575_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7192..7422
DNA (231bp) protein (77aa)
UPF0109 protein HMPREF1526_00181 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8M2_9CLOT
UPF0109 protein HMPREF1526_00181 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
RNA-binding protein
L2_039_000G1_scaffold_575_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7712..8218
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4P4_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
16S rRNA processing protein RimM
L2_039_000G1_scaffold_575_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8215..8961
DNA (747bp) protein (249aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3K4_9CLOT
L2_039_000G1_scaffold_575_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9071..9748
DNA (678bp) protein (226aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Ribose-5-phosphate isomerase A n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TX98_9CLOT
ribose 5-phosphate isomerase
L2_039_000G1_scaffold_575_12
unknown

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9787..10374
DNA (588bp) protein (196aa)

This feature has no annotations

L2_039_000G1_scaffold_575_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10560..10871
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3L1_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rplU; 50S ribosomal protein L21
L2_039_000G1_scaffold_575_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10876..11214
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4Q2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39496.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_039_000G1_scaffold_575_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11201..11479
DNA (279bp) protein (93aa)
50S ribosomal protein L27 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8N0_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
LSU ribosomal protein L27P
L2_039_000G1_scaffold_575_16
unknown

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11552..11665
DNA (114bp) protein (38aa)

This feature has no annotations

L2_039_000G1_scaffold_575_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11827..13101
DNA (1275bp) protein (425aa)
GTPase Obg n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3U6_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
obg; GTP-binding protein Obg
L2_039_000G1_scaffold_575_18
unknown

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comp(13140..13721)
DNA (582bp) protein (194aa)

This feature has no annotations

L2_039_000G1_scaffold_575_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13718..14203)
DNA (486bp) protein (162aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEN3_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGJ46533.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RNA polymerase sigma factor, sigma-70 family
L2_039_000G1_scaffold_575_20
unknown

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comp(14313..14699)
DNA (387bp) protein (129aa)

This feature has no annotations

L2_039_000G1_scaffold_575_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14683..15171)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61041.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
RNA polymerase sigma factor, sigma-70 family
L2_039_000G1_scaffold_575_22
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15276..16022)
DNA (747bp) protein (249aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RZC5_9CLOT
membrane protein
Tax=BJP_IG2069_Clostridiales_48_15
L2_039_000G1_scaffold_575_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16080..17276)
DNA (1197bp) protein (399aa)
UPF0348 protein HMPREF1526_00196 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8N4_9CLOT
UPF0348 protein HMPREF1526_00196 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_039_000G1_scaffold_575_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17433..18641
DNA (1209bp) protein (403aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Acetate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3V0_9CLOT
acetate kinase
L2_039_000G1_scaffold_575_25
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18705..19604
DNA (900bp) protein (300aa)
CAAX amino terminal protease family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q937_9BIFI
CAAX amino terminal protease family protein {ECO:0000313|EMBL:KFJ08241.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
hypothetical protein
L2_039_000G1_scaffold_575_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19615..20412
DNA (798bp) protein (266aa)
HisJ family histidinol phosphate phosphatase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4R0_9CLOT
HisJ family histidinol phosphate phosphatase {ECO:0000313|EMBL:EOQ39506.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
HisJ family histidinol phosphate phosphatase
L2_039_000G1_scaffold_575_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20436..21335
DNA (900bp) protein (300aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3L9_9CLOT
4-diphosphocytidyl-2C-methyl-D-erythritol kinase
L2_039_000G1_scaffold_575_28
unknown

Not on your lists

21391..21609
DNA (219bp) protein (73aa)

This feature has no annotations

L2_039_000G1_scaffold_575_29
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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21687..22199
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I8C5_CLOCE
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
L2_039_000G1_scaffold_575_30
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22204..23808
DNA (1605bp) protein (535aa)
O-antigen polymerase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWY2_9FIRM
O-antigen polymerase
Tax=BJP_IG2103_Clostridiales_50_15
Displaying items 1-30 of 56 in total

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