ggKbase home page

L2_039_000M1_scaffold_4540

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_4540_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..441
DNA (441bp) protein (147aa)
Glycoside hydrolase family 43, candidate beta-xylosidase/alpha-L-arabinofuranosidase n=2 Tax=Bacteroides vulgatus RepID=A6L1U1_BACV8
beta-xylosidase/alpha-L-arabinofuranosidase
Glycoside hydrolase family 43, candidate beta-xylosidase/alpha-L-arabinofuranosidase {ECO:0000313|EMBL:ABR39655.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_039_000M1_scaffold_4540_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

565..975
DNA (411bp) protein (137aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroides vulgatus RepID=A6L1U0_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS29576.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_039_000M1_scaffold_4540_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1043..2194
DNA (1152bp) protein (384aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides vulgatus RepID=D4VCH9_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR39653.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_039_000M1_scaffold_4540_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2229..5486
DNA (3258bp) protein (1086aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=root RepID=R9H0E8_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOR97388.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L2_039_000M1_scaffold_4540_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5507..6997
DNA (1491bp) protein (497aa)
Outer membrane protein n=5 Tax=Bacteroides RepID=E5UZL3_9BACE
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR39651.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_039_000M1_scaffold_4540_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7016..7420
DNA (405bp) protein (135aa)
Thioredoxin n=3 Tax=Bacteroides RepID=C6Z4X8_9BACE
Thioredoxin {ECO:0000313|EMBL:EET15837.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
disulfide-isomerase
L2_039_000M1_scaffold_4540_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7486..7878
DNA (393bp) protein (131aa)
Thioredoxin n=3 Tax=Bacteroides RepID=C6Z4X8_9BACE
disulfide-isomerase
Uncharacterized protein {ECO:0000313|EMBL:EIY81439.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_039_000M1_scaffold_4540_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7880..8677
DNA (798bp) protein (266aa)
Redoxin family protein n=3 Tax=Bacteroides RepID=C6Z4X9_9BACE
Redoxin family protein {ECO:0000313|EMBL:EET15838.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
thiol-disulfide oxidoreductase
L2_039_000M1_scaffold_4540_9
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9364..9747)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z8I9_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY31905.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Displaying 9 items

View Taxonomy