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L2_039_000M1_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_000M1_scaffold_9_1
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1..468)
DNA (468bp) protein (156aa)
Elongation factor Tu n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UMY4_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
translation elongation factor Tu
L2_039_000M1_scaffold_9_2
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1291..4494)
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNP3_MEGEL
carbamoyl-phosphate synthase large chain
L2_039_000M1_scaffold_9_3
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4495..5553)
DNA (1059bp) protein (353aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNP2_MEGEL
carbamoyl-phosphate synthase
L2_039_000M1_scaffold_9_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5550..6839)
DNA (1290bp) protein (430aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Dihydroorotase n=2 Tax=Megasphaera RepID=S7HLY2_9FIRM
dihydroorotase
L2_039_000M1_scaffold_9_5
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6823..7767)
DNA (945bp) protein (315aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Aspartate carbamoyltransferase n=2 Tax=Megasphaera RepID=G0VNP0_MEGEL
aspartate carbamoyltransferase
L2_039_000M1_scaffold_9_6
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8006..8209)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERT59553.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
L2_039_000M1_scaffold_9_7
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8335..9225)
DNA (891bp) protein (297aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:ERT59572.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ERT59572.1};; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UJI2_9FIRM
L-serine dehydratase
L2_039_000M1_scaffold_9_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9235..9894)
DNA (660bp) protein (220aa)
L-serine dehydratase n=2 Tax=Megasphaera RepID=S7HNG9_9FIRM
L-serine dehydratase {ECO:0000313|EMBL:EPP18986.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L-serine dehydratase
L2_039_000M1_scaffold_9_9
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9904..13602)
DNA (3699bp) protein (1233aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VLD5_MEGEL
ATP-dependent helicase/nuclease subunit A
L2_039_000M1_scaffold_9_10
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13589..17002)
DNA (3414bp) protein (1138aa)
ATP-dependent nuclease subunit B n=2 Tax=Megasphaera RepID=S7HTB7_9FIRM
ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EPP18984.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ATP-dependent nuclease subunit B
L2_039_000M1_scaffold_9_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17124..18092)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QYK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18983.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_039_000M1_scaffold_9_12
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18484..19242)
DNA (759bp) protein (253aa)
Transcriptional regulator n=2 Tax=Megasphaera RepID=G0VLD8_MEGEL
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDF05182.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_13
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19400..20437)
DNA (1038bp) protein (346aa)
ADP-ribosylglycohydrolase n=2 Tax=Megasphaera RepID=G0VLD9_MEGEL
ADP-ribosylglycohydrolase
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CDF05183.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_14
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20858..21325
DNA (468bp) protein (156aa)
Rrf2 family protein n=2 Tax=Megasphaera RepID=S7HS53_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:EPP18473.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
rrf2 family protein
L2_039_000M1_scaffold_9_15
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21486..22475)
DNA (990bp) protein (330aa)
Phosphate transporter family protein n=2 Tax=Megasphaera RepID=G0VNS5_MEGEL
phosphate transporter family protein
Phosphate transporter family protein {ECO:0000313|EMBL:CDF05031.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_16
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22468..23097)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Megasphaera RepID=R7MWR9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF05030.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_17
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23363..24124)
DNA (762bp) protein (254aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Triosephosphate isomerase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNR6_MEGEL
triosephosphate isomerase
L2_039_000M1_scaffold_9_18
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24166..25347)
DNA (1182bp) protein (394aa)
Phosphoglycerate kinase {ECO:0000256|SAAS:SAAS00041088}; EC=2.7.2.3 {ECO:0000256|SAAS:SAAS00041088};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Phosphoglycerate kinase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MXE5_9FIRM
phosphoglycerate kinase
L2_039_000M1_scaffold_9_19
Anaeroglobus geminatus, Anaeroglobus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25445..26479)
DNA (1035bp) protein (345aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=861450 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaeroglobus.;" source="Anaeroglobus geminatus F0357.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YJI3_9FIRM
glyceraldehyde-3-phosphate dehydrogenase
L2_039_000M1_scaffold_9_20
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26493..27515)
DNA (1023bp) protein (341aa)
Putative central glycolytic regulator n=2 Tax=Megasphaera RepID=G0VNR4_MEGEL
central glycolytic regulator
Putative central glycolytic regulator {ECO:0000313|EMBL:CDF05015.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_21
Anaeroglobus geminatus, Anaeroglobus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27563..28576)
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YJI1_9FIRM
Glyceraldehyde-3-phosphate dehydrogenase, type I {ECO:0000313|EMBL:EHM38611.1}; TaxID=861450 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaeroglobus.;" source="Anaeroglobus geminatus F0357.;"
glyceraldehyde-3-phosphate dehydrogenase, type I
L2_039_000M1_scaffold_9_22
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28811..30334)
DNA (1524bp) protein (508aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNR3_MEGEL
hypothetical protein
L2_039_000M1_scaffold_9_23
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30454..31482)
DNA (1029bp) protein (343aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Megasphaera RepID=R7MYW2_9FIRM
glyceraldehyde-3-phosphate dehydrogenase
L2_039_000M1_scaffold_9_24
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31661..32419)
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7IW67_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDF05012.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_25
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32419..33033)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UEY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERT57866.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein
L2_039_000M1_scaffold_9_26
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33993..35189
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:486 RepID=R6B069_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA46852.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
class I and II aminotransferase
L2_039_000M1_scaffold_9_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35326..37422)
DNA (2097bp) protein (699aa)
Heavy metal translocating P-type ATPase n=2 Tax=Megasphaera RepID=G0VQG0_MEGEL
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCC73688.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
heavy metal translocating P-type ATPase
L2_039_000M1_scaffold_9_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(37423..38082)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VQF9_MEGEL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73687.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_039_000M1_scaffold_9_29
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(38085..38369)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=R7MWX9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF05085.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_039_000M1_scaffold_9_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(38441..38659)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=R7MV69_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC73685.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying items 1-30 of 253 in total

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